Convert barcode QC script

NCI-RBL / iCLIP

RNA Biology Pipeline to Characterize protein-RNA Interactions

https://rbl-nci.github.io/iCLIP/

MIT License

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Convert barcode QC script #90

Closed slsevilla closed 3 years ago

slsevilla commented 3 years ago

Failure with previous python script due to file size (max out the df with large FASTQ files) and plotting error due to application from Biowulf. Update to utilize bash to generate barcode counts and R to sort and plot data.

slsevilla commented 3 years ago

completed with commit 5ff55f8cbdcaca3f1e90ac8959841c6fac45c490