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Biomarker.nci_thesaurus_concept_id query #8

Closed johnmcampbell13 closed 7 years ago

johnmcampbell13 commented 7 years ago

I am trying to use the API to query by the biomarkers.nci_thesaurus_concept_id field, but I can not get any results to return. Even though used concept_id's that appeared in the json output for other queries. I can query by diseases.nci_thesaurus_concept_id and results are returned. Here is example of result that has biomarkers, but when I use either of the concept_id's as my query term, no results are returned.

trials: [ { nct_id: "NCT01674140", biomarkers: [ { hugo_biomarker_code: null, synonyms: [ "ERBB2 Negative" ], nci_thesaurus_concept_id: "C68749", name: "HER2/Neu Negative", long_name: "HER2/Neu Negative", assay_purpose: "Eligibility Criterion - Inclusion" }, { hugo_biomarker_code: null, synonyms: [ ], nci_thesaurus_concept_id: "C15496", name: "Progesterone Receptor Positive", long_name: "Progesterone Receptor Positive", assay_purpose: "Eligibility Criterion - Inclusion" } ], nci_id: "NCI-2012-01995" }

johnmcampbell13 commented 7 years ago

I saw some commits in GitHub between Sept 14 and Sep 29 that mentioned changes to Biomarkers. One was the name for biomarkers.nci_thesaurus_concept_id was changed from nt_term_identifier. Could this be impacting the API query where I want to retrieve trials based on biomarkers.nci_thesaurus_concept_id ??

dkrylovsb commented 7 years ago

@johnmcampbell13 , this is fixed; sorry about the delay. The fix should be in Production hopefully by tomorrow.