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NEFSC / READ-EDAB-neusAtlantis

https://github.com/NEFSC/READ-EDAB-neusAtlantis/wiki
https://github.com/NEFSC/READ-EDAB-neusAtlantis/wiki
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Atl batcher #182

Closed RGamble1 closed 1 year ago

RGamble1 commented 1 year ago

Removed all hard coded paths except for two variable names. We can later make those more general. @jcaracappa1 @andybeet

jcaracappa1 commented 1 year ago

@gambler1650 @andybeet So I tried testing this but it hangs up at "WaitIndex = 26" with your test set files. There was a ton of stuff printed to command line that I had a hard time following. Is it normal to print a bunch of stuff from the log.txt?

RGamble1 commented 1 year ago

@gambler1650 @andybeet So I tried testing this but it hangs up at "WaitIndex = 26" with your test set files. There was a ton of stuff printed to command line that I had a hard time following. Is it normal to print a bunch of stuff from the log.txt?

That's actually all debug stuff that isn't intended to go to the log file. Checking on it, seems to work fine on my end.

jcaracappa1 commented 1 year ago

@gambler1650 @andybeet It looks like I had a hidden container that didn't have the right exit code or something causing the skipping in the batcher. I reset the background container list and the function worked. I think it's fine to merge.

andybeet commented 1 year ago

I haven't had time to test. Will assume its ok. i will merge and test later. Dont want to hold things up