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NEFSC / READ-SSB-CHAJI-Effort-Displacement---Scallop

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Str ROracle patch #214

Closed mle2718 closed 10 months ago

mle2718 commented 10 months ago

@mchaji : I've updated some of the data extracting code:

  1. Remove RODBC and switch to ROracle.
  2. Update the spacepanels data (port latitudes and previous port latitudes).
  3. Point to DMIS_WIND_111522 instead of DMIS_TEST
  4. tidy up the data_processing.Rmd to deal with container folders.

Can you test by:

  1. Do this in R console: 
    tinytex::install_tinytex()
  2. Check out this branch s_t_r_ROracle_patch
  3. knit the data_extracting and data_processing Rmd files.

The data extracting code take a while to run because the extraction of data using the garfo_nefsc connection is slow.

If the knitting works and you get the usual data (4 datasets in /data/intermediate) and the final_product_lease files in /data/main, please approve and merge.

mle2718 commented 10 months ago

thanks @mchaji