Test lint and coverage workflows

[metazool]

After some trial and error I've added minimal pipelines that

• run tests with pytest and generate a coverage report.
• run lint with flake8 and protest if black would make any changes to code formatting
• are configured to run as checks before merge to main

The latter is something we haven't discussed. I like the simplicity of consistency in using black for formatting everywhere and feel it shouldn't be unreasonable to introduce that to contributing researchers. I don't know about the R moral equivalent.

The code is really unfinished and you can see the coverage is weak, but it made sense to defer building out the demo in favour of sorting out the underpinnings and expressing a view of a project template. I don't see a way of auto configuring project settings when using a project template?

[github-actions[bot]]

☂️ Python Coverage

current status: ✅

Overall Coverage

Lines	Covered	Coverage	Threshold	Status
32	14	44%	0%	🟢

New Files

No new covered files...

Modified Files

File	Coverage	Status
cyto_ml/data/vectorstore.py	0%	🟢
cyto_ml/models/scivision.py	74%	🟢
TOTAL	37%	🟢

updated for commit: 8a324f4 by action🐍

[metazool]

Thank you for the comments on Teams @longr - updated the CONTRIBUTING guide with more links.

I would appreciate an approve even at this work-in-progress state, the workflows will stop me wandering off too far on another branch, and the project is still very much named [insert name here]