Closed cloudhan closed 4 years ago
OK, I suddenly figure out that this project is not using setuptools
's setup
, so there is no way to automatically install the setup_requires
as usual.
Close for now, manually execute pip install scikit-build
is a viable solution. (Doing it automatically should be preferred.)
setup requires isn't compatible with anaconda.
Close for now, manually execute
pip install scikit-build
is a viable solution. (Doing it automatically should be preferred.)
After installing it manually I got this output:
(venv) (base) nicolo@nicolo-XPS-15-9570:~/PycharmProjects/ASoC-algo/ModelSelection$ pip install timemory
Collecting timemory
Using cached timemory-3.0.1.tar.gz (3.2 MB)
Building wheels for collected packages: timemory
Building wheel for timemory (setup.py) ... error
ERROR: Command errored out with exit status 1:
command: /home/nicolo/PycharmProjects/ASoC-algo/venv/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-6m3brbi9/timemory/setup.py'"'"'; __file__='"'"'/tmp/pip-install-6m3brbi9/timemory/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-mjalmrsa
cwd: /tmp/pip-install-6m3brbi9/timemory/
Complete output (9 lines):
Traceback (most recent call last):
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/skbuild/setuptools_wrap.py", line 560, in setup
cmkr = cmaker.CMaker(cmake_executable)
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/skbuild/cmaker.py", line 95, in __init__
self.cmake_version = get_cmake_version(self.cmake_executable)
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/skbuild/cmaker.py", line 82, in get_cmake_version
"Problem with the CMake installation, aborting build. CMake executable is %s" % cmake_executable)
Problem with the CMake installation, aborting build. CMake executable is cmake
----------------------------------------
ERROR: Failed building wheel for timemory
Running setup.py clean for timemory
Failed to build timemory
Installing collected packages: timemory
Running setup.py install for timemory ... error
ERROR: Command errored out with exit status 1:
command: /home/nicolo/PycharmProjects/ASoC-algo/venv/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-6m3brbi9/timemory/setup.py'"'"'; __file__='"'"'/tmp/pip-install-6m3brbi9/timemory/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-ug7yyoyi/install-record.txt --single-version-externally-managed --compile --install-headers /home/nicolo/PycharmProjects/ASoC-algo/venv/include/site/python3.6/timemory
cwd: /tmp/pip-install-6m3brbi9/timemory/
Complete output (9 lines):
Traceback (most recent call last):
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/skbuild/setuptools_wrap.py", line 560, in setup
cmkr = cmaker.CMaker(cmake_executable)
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/skbuild/cmaker.py", line 95, in __init__
self.cmake_version = get_cmake_version(self.cmake_executable)
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/skbuild/cmaker.py", line 82, in get_cmake_version
"Problem with the CMake installation, aborting build. CMake executable is %s" % cmake_executable)
Problem with the CMake installation, aborting build. CMake executable is cmake
----------------------------------------
ERROR: Command errored out with exit status 1: /home/nicolo/PycharmProjects/ASoC-algo/venv/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-6m3brbi9/timemory/setup.py'"'"'; __file__='"'"'/tmp/pip-install-6m3brbi9/timemory/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-ug7yyoyi/install-record.txt --single-version-externally-managed --compile --install-headers /home/nicolo/PycharmProjects/ASoC-algo/venv/include/site/python3.6/timemory Check the logs for full command output.
Any suggestion for a solution?
Could you post the log from pip install -vvv timemory
?
The current pip release tries to detect a lot of things implicitly since pip install gives you basically no way to specify CMake options cleanly
(venv) (base) nicolo@nicolo-XPS-15-9570:~/PycharmProjects/ASoC-algo/ModelSelection$ pip install -vvv timemory
Non-user install because user site-packages disabled
Created temporary directory: /tmp/pip-ephem-wheel-cache-9k6qvjt_
Created temporary directory: /tmp/pip-req-tracker-s8_sch9b
Initialized build tracking at /tmp/pip-req-tracker-s8_sch9b
Created build tracker: /tmp/pip-req-tracker-s8_sch9b
Entered build tracker: /tmp/pip-req-tracker-s8_sch9b
Created temporary directory: /tmp/pip-install-3datj26q
1 location(s) to search for versions of timemory:
* https://pypi.org/simple/timemory/
Fetching project page and analyzing links: https://pypi.org/simple/timemory/
Getting page https://pypi.org/simple/timemory/
Found index url https://pypi.org/simple
Looking up "https://pypi.org/simple/timemory/" in the cache
Request header has "max_age" as 0, cache bypassed
Starting new HTTPS connection (1): pypi.org:443
https://pypi.org:443 "GET /simple/timemory/ HTTP/1.1" 304 0
Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/4d/77/4e5c0e6dbe6e14fb176f48f6d72a40d680e6c091c774a6fa4fdebfa189f5/TiMemory-1.0b1-py3.6-macosx-10.13-x86_64.egg#sha256=d9493d0f59bf423d728906b085775847a292a8be9d25d5cabe240232beeffce1 (from https://pypi.org/simple/timemory/) (requires-python:>=2.6)
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Found link https://files.pythonhosted.org/packages/ba/35/ec31063792ba2da881d3838aadfca602849cfd55ebdd01430008df0ae8af/timemory-3.0.0rc3.tar.gz#sha256=d546a0788e21605fa64f323c8bee948317148913f3253c5acbecedf639e08a24 (from https://pypi.org/simple/timemory/) (requires-python:>=2.6), version: 3.0.0rc3
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Found link https://files.pythonhosted.org/packages/2a/17/b788e24a226dbf265339cec02dd712e277a449a94b1b81697c401b4b3315/timemory-3.1.0.dev0.tar.gz#sha256=04cb8fa2641103fc325d9255ffb561bab8c453cdb946a55aa02fc728e8a3bef9 (from https://pypi.org/simple/timemory/) (requires-python:>=2.7), version: 3.1.0.dev0
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Found link https://files.pythonhosted.org/packages/35/9f/30f584fb12bdafd4eedec2ee0ef4818ff5a936027737f35318b65fb50775/timemory-3.1.0.dev2.tar.gz#sha256=ec67e93e7b8dac71c68e23573d54145d76d4a3a331962025e2c92b19724addb7 (from https://pypi.org/simple/timemory/) (requires-python:>=2.7), version: 3.1.0.dev2
Found link https://files.pythonhosted.org/packages/6b/ba/076837199ba3c5f8a4c23fe677ad0a45e37480c8d194c8b2f326e2e30d83/timemory-3.1.0.dev3.tar.gz#sha256=15c3183737f0944fa1cec145eb6ac917b73c9d2c5ca73f96b41777b0df5d8303 (from https://pypi.org/simple/timemory/) (requires-python:>=2.7), version: 3.1.0.dev3
Found link https://files.pythonhosted.org/packages/12/d4/ad125952ef047816fcaf4d73089a786c41e8c3c93f8b83c23afb2080e95a/timemory-3.1.0.dev4.tar.gz#sha256=2b7262138209914525ff5c63ebaf2d4025c7e060f1f9464f1da073f2f6558be7 (from https://pypi.org/simple/timemory/) (requires-python:>=2.7), version: 3.1.0.dev4
Found link https://files.pythonhosted.org/packages/1a/1d/b8f0eb9a49740a4a6827b1a7900ec8d5ac34d36cb1fdd7dd2cc0bbe5ee39/timemory-3.1.0.dev5.tar.gz#sha256=b6d3d59fbaacd087bc5d5a9c181da2ebeebc5bf2361db9ccffd8bd2f919940b4 (from https://pypi.org/simple/timemory/) (requires-python:>=2.7), version: 3.1.0.dev5
Found link https://files.pythonhosted.org/packages/b2/ef/ee54f9c31897e06afc74b9c3abb3a9d660754f5f5bf02ee68fd8621022fb/timemory-3.1.0.dev6.tar.gz#sha256=eb89575dc301a2b28f548380fe94d66b5a6e556451b79b8c264f4ccee3b826cf (from https://pypi.org/simple/timemory/) (requires-python:>=2.7), version: 3.1.0.dev6
Found link https://files.pythonhosted.org/packages/5d/21/df346aa2d62327f66d3f9e5edbeac7da6a1b908d64ce75b69b71ff346e3d/timemory-3.1.0.dev7.tar.gz#sha256=a71271e1b320f2f4f330b6a0fdd2ba642ed79f7f1134a8afbb4b3adc907d4baf (from https://pypi.org/simple/timemory/) (requires-python:>=2.7), version: 3.1.0.dev7
Found link https://files.pythonhosted.org/packages/fa/87/8afd6e5cc095538b4479ef569c73e9330f6b1dba038fa9c202059e20e69e/timemory-3.1.0.dev8.tar.gz#sha256=9a7df8d255fbdf52fa18c5503f7c1ceff80dafa8d74aa203f539fc9c1598323b (from https://pypi.org/simple/timemory/) (requires-python:>=2.7), version: 3.1.0.dev8
Found link https://files.pythonhosted.org/packages/de/32/998d958f54e45d8ae24ecead429ece0409ee66979305c03217826adc577f/timemory-3.1.0.dev9.tar.gz#sha256=d9680a145d1e4aa5e64b94f7c4f86f1269c001bad13d0a3f909bbe5026450ef4 (from https://pypi.org/simple/timemory/) (requires-python:>=2.7), version: 3.1.0.dev9
Found link https://files.pythonhosted.org/packages/f9/96/2f82d9b3a60e532e32e619b4f69b880bb84c8433bfe8bc1d12fa5c7497fc/timemory-3.1.0.dev10.tar.gz#sha256=1d7832d3cec6a9ec0f249e4e558b397b042c4db3dbbe06acda3c7923ad46b2d4 (from https://pypi.org/simple/timemory/) (requires-python:>=2.7), version: 3.1.0.dev10
Found link https://files.pythonhosted.org/packages/53/55/187ed90e18c575bf94367883a930abf4eb214d1ab13f9555bdee4a5ab9ab/timemory-3.1.0.dev11.tar.gz#sha256=d0fbdc5c76f279d684ddd1f37434861027f6af9f47537ccb022b37b44ac41622 (from https://pypi.org/simple/timemory/) (requires-python:>=2.7), version: 3.1.0.dev11
Found link https://files.pythonhosted.org/packages/52/d6/2fe3b5acb03e465247a8c3dfdc0a04adca749c1bf35ec06779ce2ce06cae/timemory-3.1.0.dev12.tar.gz#sha256=d490fca9f02f9df80f4273e4049d839f5521e89618db61c2123d727dbdf423d5 (from https://pypi.org/simple/timemory/) (requires-python:>=2.7), version: 3.1.0.dev12
Given no hashes to check 21 links for project 'timemory': discarding no candidates
Using version 3.0.1 (newest of versions: 1.1.2, 1.1.2.post0, 1.1.3, 1.1.4, 1.1.5, 1.1.6, 1.1.7, 1.2.0, 1.2.1, 1.2.2, 1.3.0, 1.3.1, 2.0.0, 2.0.1, 2.1.0, 2.2.0, 2.2.1, 2.2.2, 3.0.0, 3.0.0.1, 3.0.1)
Collecting timemory
Created temporary directory: /tmp/pip-unpack-f5e0r_l4
Looking up "https://files.pythonhosted.org/packages/93/81/f998caa046fb5125d0125a053e3343f20befef9a5642e1eb35a2a09236a5/timemory-3.0.1.tar.gz" in the cache
Current age based on date: 27057
Ignoring unknown cache-control directive: immutable
Freshness lifetime from max-age: 365000000
The response is "fresh", returning cached response
365000000 > 27057
Using cached timemory-3.0.1.tar.gz (3.2 MB)
Added timemory from https://files.pythonhosted.org/packages/93/81/f998caa046fb5125d0125a053e3343f20befef9a5642e1eb35a2a09236a5/timemory-3.0.1.tar.gz#sha256=a4ee67e20fb8536d2c08d643514229a34fe4e748029dc54cf916a3eca5c09417 to build tracker '/tmp/pip-req-tracker-s8_sch9b'
Running setup.py (path:/tmp/pip-install-3datj26q/timemory/setup.py) egg_info for package timemory
Created temporary directory: /tmp/pip-pip-egg-info-mhuplr_e
Running command python setup.py egg_info
running egg_info
creating /tmp/pip-pip-egg-info-mhuplr_e/timemory.egg-info
writing /tmp/pip-pip-egg-info-mhuplr_e/timemory.egg-info/PKG-INFO
writing dependency_links to /tmp/pip-pip-egg-info-mhuplr_e/timemory.egg-info/dependency_links.txt
writing entry points to /tmp/pip-pip-egg-info-mhuplr_e/timemory.egg-info/entry_points.txt
writing top-level names to /tmp/pip-pip-egg-info-mhuplr_e/timemory.egg-info/top_level.txt
writing manifest file '/tmp/pip-pip-egg-info-mhuplr_e/timemory.egg-info/SOURCES.txt'
package init file 'timemory/__init__.py' not found (or not a regular file)
reading manifest file '/tmp/pip-pip-egg-info-mhuplr_e/timemory.egg-info/SOURCES.txt'
writing manifest file '/tmp/pip-pip-egg-info-mhuplr_e/timemory.egg-info/SOURCES.txt'
Source in /tmp/pip-install-3datj26q/timemory has version 3.0.1, which satisfies requirement timemory from https://files.pythonhosted.org/packages/93/81/f998caa046fb5125d0125a053e3343f20befef9a5642e1eb35a2a09236a5/timemory-3.0.1.tar.gz#sha256=a4ee67e20fb8536d2c08d643514229a34fe4e748029dc54cf916a3eca5c09417
Removed timemory from https://files.pythonhosted.org/packages/93/81/f998caa046fb5125d0125a053e3343f20befef9a5642e1eb35a2a09236a5/timemory-3.0.1.tar.gz#sha256=a4ee67e20fb8536d2c08d643514229a34fe4e748029dc54cf916a3eca5c09417 from build tracker '/tmp/pip-req-tracker-s8_sch9b'
Building wheels for collected packages: timemory
Created temporary directory: /tmp/pip-wheel-2xk822oo
Building wheel for timemory (setup.py) ... Destination directory: /tmp/pip-wheel-2xk822oo
Running command /home/nicolo/PycharmProjects/ASoC-algo/venv/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-3datj26q/timemory/setup.py'"'"'; __file__='"'"'/tmp/pip-install-3datj26q/timemory/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-2xk822oo
Traceback (most recent call last):
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/skbuild/setuptools_wrap.py", line 560, in setup
cmkr = cmaker.CMaker(cmake_executable)
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/skbuild/cmaker.py", line 95, in __init__
self.cmake_version = get_cmake_version(self.cmake_executable)
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/skbuild/cmaker.py", line 82, in get_cmake_version
"Problem with the CMake installation, aborting build. CMake executable is %s" % cmake_executable)
Problem with the CMake installation, aborting build. CMake executable is cmake
error
ERROR: Failed building wheel for timemory
Running setup.py clean for timemory
Running command /home/nicolo/PycharmProjects/ASoC-algo/venv/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-3datj26q/timemory/setup.py'"'"'; __file__='"'"'/tmp/pip-install-3datj26q/timemory/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
running clean
'_skbuild/linux-x86_64-3.6/setuptools/lib' does not exist -- can't clean it
'_skbuild/linux-x86_64-3.6/setuptools/bdist.linux-x86_64' does not exist -- can't clean it
'_skbuild/linux-x86_64-3.6/setuptools/scripts-3.6' does not exist -- can't clean it
Failed to build timemory
Installing collected packages: timemory
Created temporary directory: /tmp/pip-record-exrmxwpw
Running command /home/nicolo/PycharmProjects/ASoC-algo/venv/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-3datj26q/timemory/setup.py'"'"'; __file__='"'"'/tmp/pip-install-3datj26q/timemory/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-exrmxwpw/install-record.txt --single-version-externally-managed --compile --install-headers /home/nicolo/PycharmProjects/ASoC-algo/venv/include/site/python3.6/timemory
Traceback (most recent call last):
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/skbuild/setuptools_wrap.py", line 560, in setup
cmkr = cmaker.CMaker(cmake_executable)
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/skbuild/cmaker.py", line 95, in __init__
self.cmake_version = get_cmake_version(self.cmake_executable)
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/skbuild/cmaker.py", line 82, in get_cmake_version
"Problem with the CMake installation, aborting build. CMake executable is %s" % cmake_executable)
Problem with the CMake installation, aborting build. CMake executable is cmake
Running setup.py install for timemory ... error
ERROR: Command errored out with exit status 1: /home/nicolo/PycharmProjects/ASoC-algo/venv/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-3datj26q/timemory/setup.py'"'"'; __file__='"'"'/tmp/pip-install-3datj26q/timemory/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-exrmxwpw/install-record.txt --single-version-externally-managed --compile --install-headers /home/nicolo/PycharmProjects/ASoC-algo/venv/include/site/python3.6/timemory Check the logs for full command output.
Exception information:
Traceback (most recent call last):
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/pip/_internal/req/req_install.py", line 841, in install
req_description=str(self.req),
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/pip/_internal/operations/install/legacy.py", line 86, in install
raise LegacyInstallFailure
pip._internal.operations.install.legacy.LegacyInstallFailure
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/pip/_internal/cli/base_command.py", line 188, in _main
status = self.run(options, args)
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/pip/_internal/cli/req_command.py", line 185, in wrapper
return func(self, options, args)
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/pip/_internal/commands/install.py", line 407, in run
use_user_site=options.use_user_site,
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/pip/_internal/req/__init__.py", line 71, in install_given_reqs
**kwargs
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/pip/_internal/req/req_install.py", line 845, in install
six.reraise(*exc.parent)
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/pip/_vendor/six.py", line 703, in reraise
raise value
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/pip/_internal/operations/install/legacy.py", line 76, in install
cwd=unpacked_source_directory,
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/pip/_internal/utils/subprocess.py", line 274, in runner
spinner=spinner,
File "/home/nicolo/PycharmProjects/ASoC-algo/venv/lib/python3.6/site-packages/pip/_internal/utils/subprocess.py", line 241, in call_subprocess
raise InstallationError(exc_msg)
pip._internal.exceptions.InstallationError: Command errored out with exit status 1: /home/nicolo/PycharmProjects/ASoC-algo/venv/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-3datj26q/timemory/setup.py'"'"'; __file__='"'"'/tmp/pip-install-3datj26q/timemory/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-exrmxwpw/install-record.txt --single-version-externally-managed --compile --install-headers /home/nicolo/PycharmProjects/ASoC-algo/venv/include/site/python3.6/timemory Check the logs for full command output.
Removed build tracker: '/tmp/pip-req-tracker-s8_sch9b'
I am not sure you have CMake installed
I am not sure you have CMake installed
You right, very stupid error. Sorry about that. Thank you!
Executing the
pip install timemory
results in the following error:it seems some setup packages are not installed properly.