Closed zkamvar closed 8 years ago
Apex has been updated. As soon as the docker container is updated, we should create a pull request from the apex-update branch.
I triggered a rebuild, succeeded. Submitted pull request, see #181. Triggered re-run of the CI test.
I believe this is done.
The apex package is going to update soon (See: https://github.com/thibautjombart/apex/issues/46). With this update comes a change to the accessor
locusNames()
. It has now been changed togetLocusNames()
andsetLocusNames()
. This will have to change in these two lines: https://github.com/NESCent/popgenInfo/blame/cb0d66460c062ff8e2990c185b7f737f69f54050/use/PopDiffSequenceData.Rmd#L50-L51The pull request should only be initiated once apex is on CRAN and the Docker container is rebuilt