mmlopezu
commented
9 years ago Hi Hilmar,
Thanks for checking. It is not supposed to be like that. I'll work on it before our meeting this Tuesday.
Margarita
On Sat, May 9, 2015 at 1:32 PM, Hilmar Lapp notifications@github.com wrote:
The code (and hence the results) for Overall F-statistics and Pairwise Fst are exactly the same under Pairwise Population Differentiation https://github.com/NESCent/popgenInfo/blob/master/use/PopDiffSequenceData.Rmd#pairwise-population-differentiation in the Population Differentiation for Sequence Data http://nescent.github.io/popgenInfo/PopDiffSequenceData.html vignette. Perhaps this is to be expected (I actually don't know), but if it is, shouldn't it at least be briefly explained why the code has to be the same for both? Or change the text to indicate that these two are synonymous (though I thought they are not).
— Reply to this email directly or view it on GitHub https://github.com/NESCent/popgenInfo/issues/37.
Margarita M. López-Uribe Postdoctoral Researcher Department of Entomology North Carolina State University https://sites.google.com/a/cornell.edu/mm-lopez-uribe/ https://sites.google.com/a/cornell.edu/margarita-m-lopez-uribe/
The code (and hence the results) for Overall F-statistics and Pairwise Fst are exactly the same under Pairwise Population Differentiation in the Population Differentiation for Sequence Data vignette. Perhaps this is to be expected (I actually don't know), but if it is, shouldn't it at least be briefly explained why the code has to be the same for both? Or change the text to indicate that these two are synonymous (though I thought they are not).