Remove OME-TIFF saving from first Image File Formats activity

[tischi]

Hi @felixS27,

I think we should remove the OME-TIFF saving part from this: https://neubias.github.io/training-resources/image_file_formats/index.html?id_activity_platform-0=python-bioio-activity-0#open

We should probably also rename the activity to contain the word "open".

The OME-TIFF saving part should go into a dedicated OME-TIFF module.

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If you want you could add a python napari implementation to this activity: https://neubias.github.io/training-resources/image_file_formats/index.html?id_activity_platform-0=null-activity-0#save

There the focus is not so much on OME-TIFF specifically, but any kind of TIFF would do.

[felixS27]

I will have a look into this.

[felixS27]

Maybe for clarification... Do you mean a module on how to save images from napari? So the module should contain roughly:

• Load an image into napari
• save it whilst exploring the different saving options within napari (like save Screenshot, save specific layer vs all layers...)

[tischi]

I mean this TIFF module, in the tiff branch. That is, one module that explains TIFF in detail (similar to the OME-Zarr module). I don't think that this module should focus on napari, unless we need it too look at an image.

[felixS27]

Okay, then I will shorten the image file format python script and rename it and make a pull request. About the tiff module I will contact you again when I have wrapped my head around it.