switch to CSV templated curation

NFDI4Chem / VibrationalSpectroscopyOntology

WORK IN PROGRESS - The Vibration Spectroscopy Ontology defines technical terms with which research data produced in vibrational spectroscopy experiments can be semantically enriched, made machine readable and FAIR.

https://nfdi4chem.github.io/VibrationalSpectroscopyOntology/

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switch to CSV templated curation #9

Closed StroemPhi closed 2 years ago

StroemPhi commented 2 years ago

In our last NFDI4CHem Raman Spectroscopy task force call (11.08.2022), we decided that it would be better to build the ontology from CSV templates using ROBOT in order to make the ontology development easier for external domain experts.

[x] export existing VISPRO classes to ROBOT conform CSVs
[x] find out how to configure the vispro.yaml to have a makefile recipe with which to build vispro-edit.owl and the releases from the CSV templates

StroemPhi commented 2 years ago

First step is to export the existing VISPRO classes using ROBOT export: robot export --input vispro-edit.owl --header "IRI|ID|LABEL|Type|SubClass Of|SubClasses|Equivalent Class|SubProperty Of|Equivalent Property|Disjoint With" --export vispro-terms.csv Then this export needs to be transformed into a proper ROBOT template format in order to be used as component as suggested in https://github.com/INCATools/ontology-development-kit/issues/613#issuecomment-1218302708.