NGSEP is an integrated framework for analysis of high throughput sequencing (HTS) reads. The main functionality of NGSEP is the variants detector, which allows to make integrated discovery and genotyping of Single Nucleotide Variants (SNVs), insertions, deletions, and genomic regions with copy number variation (CNVs).
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New Invertible Hash Function - getHash - ShortKmerCodesTable #48
The getHash method associated with the ReadsAligner is modified. The existent implementation was changed to a prime number by an invertible Hash function that reduces collisions between values.
The getHash method associated with the ReadsAligner is modified. The existent implementation was changed to a prime number by an invertible Hash function that reduces collisions between values.