All sbatch scripts probably needs to have a list of available directories that the pipeline scripts can make use of. This cant be done directly in the sbatch scripts but can be added as a output from a python script and then added as an argument for each pipeline script. We can then match the job queue id with the directory in the list.
All sbatch scripts probably needs to have a list of available directories that the pipeline scripts can make use of. This cant be done directly in the sbatch scripts but can be added as a output from a python script and then added as an argument for each pipeline script. We can then match the job queue id with the directory in the list.