NHMDenmark / Herbarium-Sheets-workstation

Workstation and workflows for herbarium sheets for mass digitisation (DaSSCo)
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Herbarium Workflow Guides Q3 updates #102

Open nms419 opened 1 month ago

nms419 commented 1 month ago

Updates needed July - September 2024.

Herbarium Imaging Guide:

Herbarium Barcode Workflow Guide:

chelseagraham commented 1 month ago

Please print up copies and include at all workstations once revisions have been made and accepted.

Ideally - save on workstation desktops - as agreed at our digitiser meeting

RebekkaML commented 1 month ago

Regarding the imaging guide, Pip suggested to explain the missing barcodes / MSOs table in the Issues log in more detail, especially the new format with the reference barcode (#101). At the moment it only says "flag the specimen in the Issues Log, as not entered into app", which we could expand a bit.

PipBrewer commented 1 month ago

In herbarium imaging guide on page 13 it says "If you encounter a multi object specimen containing multiple barcoded specimens and labels on the same sheets". Surely this should say multi specimen object, not multi object specimen?

PipBrewer commented 1 month ago

Can we add links to easily navigate the document as agreed at one of our team meetings? So that when you click on the contents section - you go directly to that section?

PipBrewer commented 1 month ago

Perhaps instead of saying disposable barcode - we could call them linked asset identifiers?

nms419 commented 1 month ago

Can we add links to easily navigate the document as agreed at one of our team meetings? So that when you click on the contents section - you go directly to that section?

This is already implemented. You should be able to jump to the relevant section by using ctrl+click in the table of contents. Any reference to a section (e.g. "see 'Intial Install'") should also be a hyperlink.

nms419 commented 1 month ago

In herbarium imaging guide on page 13 it says "If you encounter a multi object specimen containing multiple barcoded specimens and labels on the same sheets". Surely this should say multi specimen object, not multi object specimen?

It's definitely worded unclearly. I think it might actually refer to MOS's with labels on all sheets? Do they still need to be linked with a D-BC?

chelseagraham commented 1 month ago

Please add to the Herbarium Imaging Guide camera set-up section how to ensure the camera is set to electronic shutter (with screenshot from Fuji guide, if possible).

nms419 commented 1 month ago

Please add to the Herbarium Imaging Guide camera set-up section how to ensure the camera is set to electronic shutter (with screenshot from Canon guide, if possible).

Screenshots from the guide is absolutely possible, but surely it would make more sense from the Fuji guide for the Herbarium?

CG: Yes ;) I don't know my own name today! I've edited it now.

PipBrewer commented 1 month ago

In herbarium imaging guide on page 13 it says "If you encounter a multi object specimen containing multiple barcoded specimens and labels on the same sheets". Surely this should say multi specimen object, not multi object specimen?

It's definitely worded unclearly. I think it might actually refer to MOS's with labels on all sheets? Do they still need to be linked with a D-BC?

Yes.

nms419 commented 3 weeks ago

Document title of the guides have followed "x edit yyyymmdd"-format to differentiate between them.

This has been changed to "v.1.2.3"-format where 1 signifies major changes, 2 substantial changes and 3 minor changes (starting at v.1.0.0).

Quaterly updates fall under number 2.

Old versions in the Archive have had their version number added in paranthesis and current guides in the Master folder have had their title changed to version format with a 1 at the end to signify a title change.

The new version-format follows the old edit-format - 1st edit has become v.1.1.0, 2nd edit is 1.2.0 etc. The date of the edit can still be found in the documents header.

Currently we are updating Herbarium Imaging Guide v.1.4.0 and Herbarium Barcode Workflow Guide v.1.3.0, which can be found in the "Editing in process" folder.

nms419 commented 3 weeks ago

When dealing with Herbarium MSO's, we write the number or letter of the label/specimen that the barcode is assigned to in pencil.

It's my impression that most digitizers write the identifier under the barcode (which is the instruction in the Issues Protocol), but the Barcoding Guide says to write it next to the barcode.

It seems like there is less chance of confusion if the identifier is written under the barcode, but please let me know of any arguments to the contrary.

If there is no objections I'll edit the Barcoding Guide to be in alignment with the Issues Protocol.

PipBrewer commented 2 weeks ago

When dealing with Herbarium MSO's, we write the number or letter of the label/specimen that the barcode is assigned to in pencil.

It's my impression that most digitizers write the identifier under the barcode (which is the instruction in the Issues Protocol), but the Barcoding Guide says to write it next to the barcode.

It seems like there is less chance of confusion if the identifier is written under the barcode, but please let me know of any arguments to the contrary.

If there is no objections I'll edit the Barcoding Guide to be in alignment with the Issues Protocol.

What is the purpose of writing an identifier? Where is this decision documented? @chelseagraham

chelseagraham commented 2 weeks ago

This is in the Issues Protocol (N:/SCI-SNM-DigitalCollections/DaSSCo/Workflows and workstations/GUIDES/2 Masters/Herbarium Guides/Herbarium_Imaging_issues_protocol_v2.docx) written by Matilde after very close collaboration and discussion with the Collections Managers, including Jens. The date on it is 11 January 2024, but I believe that she was in discussion about this particular issue earlier even that and it had been adopted as a protocol from a much earlier point. I can still bring this up in our next Herbarium Catch-up in September.

PipBrewer commented 2 weeks ago

@chelseagraham No need if it has been fully discussed and documented and doesn't slow down digitisation. Thank you.

chelseagraham commented 2 weeks ago

We discussed it during the training yesterday and the CMs are happy with what has been discussed, documented and applied :) I will delete it from the September Catch-up Meeting agenda!