Open chelseagraham opened 6 months ago
22 February @chelseagraham and @Gomismis BROAD REQUIREMENTS OF ALICE (static Danish Beetle FOV set-up) What we want to achieve: 1/ Efficient, quick digitization with minimal interaction with a GUI • A GUI driving digitization where minimal clicks and configuration are necessary (one or two clicks per specimen, customized presets for specific cases or grouping of cameras) 2/ Minimal interaction with the specimen • Stage and camera array to support imaging of insects with labels-on (no time spent taking off labels) 3/ No extraneous physical movement by the digitizer • Ergonomic workspace for digitizer (no unnecessary repetitive motion) 4/ Safe environment for specimens • Smooth sledge movement (minimal vibration) 5/ Images of labels where writing is legible • Cameras at static, equidistant locations so focus can be locked • Images in-focus • Images high enough resolution to allow for OCR 6/ High resolution images of insects • Insect cameras at static, equidistant locations • Scale and Color Checker to be imaged separately from insect to keep FOV tight around subject • Stacked images or images with a depth of field deep enough to capture details from top to bottom of subject • Images in focus 7/ Color correct, scaled images • Use CH standards in color target and scale bar 8/ Good lighting • Ensure illumination is even
Updated draft of requirements BROAD REQUIREMENTS OF ALICE.docx
Made a first stab at an excel sheet BROAD REQUIREMENTS OF ALICE.xlsx
Not yet on N:/
Updated on OneDrive /Library/CloudStorage/OneDrive-UniversityofCopenhagen/DaSSCo Workflows/Pinned Insects/ALICE
8 July: updated and shared with Kim, Pip, Bhupjit and Lars (the later two for discussion about Canon integration into entomoloGUI). After a few revisions/reorganizations, this can be shared with the entomology group.
10 July Current version. https://alumni-my.sharepoint.com/:x:/g/personal/btw897_ku_dk/ERRa4lkjzwtKgUJo8n1oJc4BecKIKrYIVP6FANcWgJ8awg?e=5LcPQf Has not been shared with entomologists yet.
I think we can share the document and invite comments. We will need to add a date column so that the date the requirements were agreed is noted. We should also clearly mark it as version 1. We will no doubt add requirements. This document should be separate from working notes and will be an official representation.
I tried to make a version and save it in OneDrive to share with the Entomology group https://alumni-my.sharepoint.com/:x:/g/personal/rqz615_ku_dk/EUmFZWEBIghCg0HpsNUDGoABtztJmsEE0piD1XZVR85J2w?e=fk8cWB OneDrive is a little different on a Mac and I can't seem to find it via my desktop folder, or if it was successful in general. @PipBrewer can you please check? Afterward, I can send around to our Entomology group ahead of the Entomology Catch-Up meeting this week.
Chelsea to draft requirements for ALICE with Matilde ahead of 22 February meeting with Pip