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NIAID-Data-Ecosystem / nde-crawlers

Harvesting infrastructure to collect and standardize dataset and computational tool metadata
Apache License 2.0
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Create hierarchical searching based on ontologies #28

Open flaneuse opened 2 years ago

flaneuse commented 2 years ago

For instance: using the controlled vocabulary of species tied to the NCBI Taxonomy Ontology, search for all E. coli species and strains/subspecies, or synonyms ("human" = "Homo sapiens" = "H. sapiens" = 9606)

flaneuse commented 1 year ago

See also: https://github.com/NIAID-Data-Ecosystem/nde-portal/issues/89

flaneuse commented 1 year ago

@newgene : we should also look at incorporating MyDisease to translate from MeSH terms standardized using PubTator to MONDO, etc.