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NIB-SI / skm-tools

Scripts and utilities for leveraging SKM resources
GNU General Public License v3.0
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Adding skm_tools to PyPi #2

Open mbeavitt opened 4 weeks ago

mbeavitt commented 4 weeks ago

Hello,

I'm finding your tools really useful for exploring the curated datasets, and I was just wondering if you were planning to add the libraries to PyPi? It would be nice to be able to 'pip install' the tools so that they can be incorporated easily into other code without having to manually link the libraries with sys.path.append().

carissableker commented 3 weeks ago

Hi!

I am not planning to add skm_tools to PyPI, but I can add a setup.py so that it can be installed using pip directly from the repo (cf https://pip.pypa.io/en/stable/topics/vcs-support/).

Thanks for the suggestion!

carissableker commented 3 weeks ago

This should work for now:

pip install "skm-tools[cytoscape,pdf] @ git+ssh://git@github.com/NIB-SI/skm-tools.git@issue2"

After some more testing, I'll merge the fix to the main branch and add install instructions to the README.

mbeavitt commented 3 weeks ago

TYSM!