Closed liberaliscomputing closed 3 years ago
https://terminology.hl7.org/1.0.0/CodeSystem-v3-RoleCode.html seems like a reasonable choice for ontology - given our desire to stay close to "stock" FHIR.
Things to think about:
{
'#N/A',
'Affected',
'Affected1',
'Affected2',
'Aunt or Uncle',
'Brother',
'Brother or Sister',
'Brother or Sister in Law',
'Brother or Sister-in-Law',
'Brother or Sister-in-law',
'Cousin',
'DZ twin',
'Father',
'Father1',
'First Cousin',
'Husband or Wife',
'Identical Twin of Proband',
'Maternal Aunt or Uncle',
'Maternal Grandparent',
'Mother',
'Mother1',
'Nephew or Niece',
'Not Related to the Proband',
'Not related to the Proband',
'Other 2nd Degree Relative',
'Other 2nd degree relative',
'Other 3rd Degree Relative',
'Other 3rd degree relative',
'Other 4th Degree Relative',
'Other 4th degree relative',
'Other Not Related to Proband',
'Other fifth degree relative',
'Other forth degree relative',
'Other not related to proband relative',
'Other second degree relative',
'Other third degree relative',
'Parent',
'Paternal Aunt or Uncle',
'Paternal Grandparent',
'Proband',
'ProbandBrother or Sister',
'Sibling',
'Sister',
'Son or Daughter',
'Son or Daughter-in-law',
'Twin brother',
'Twin sister',
'Unaffected Sibling',
'affected half-sib',
'affected sibling',
'affected twin',
'brother',
'brother2',
'father',
'father2',
'mother',
'mother2/sister1',
'proband',
'sibling',
'sister2'
}
It would be useful to document if we have considered a more specific model i.e:
Re @bwalsh, thanks for pointing this out! Yes, the role code ValueSet may not be enough inclusive. GA4GH's pedigree WG also proposes a new ValueSet (https://docs.google.com/spreadsheets/d/1AxRufaSICADO_f9CAhbkVh5dChT4FjHZgvGFFdC-2WI/edit?pli=1#gid=140786158). We may want to have a discussion about using a more authoritative, inclusive ValueSet for pedigree?
Re @bwalsh,
It would be useful to document if we have considered a more specific model i.e:
* http://hl7.org/fhir/relatedperson.html * http://hl7.org/fhir/valueset-relatedperson-relationshiptype.html
Information about a person that is involved in the care for a patient, but who is not the target of healthcare, nor has a formal responsibility in the care process.
contactRole2
seems less relevant to our effort in modeling pedigree.
This PR adds:
It also closes #21.
Re @RobertJCarroll @allisonheath