This tool allows segmentin brain MRI using a multi-atlas based approach either via joint label fusion (ANTS) or via generating a subject-specific atlas.
The choice whether to run neoseg or ABC is not stored in the parameter xml file and thus by default ABC is always on. Only the GUI version allows to change this.
The choice whether to run neoseg or ABC is not stored in the parameter xml file and thus by default ABC is always on. Only the GUI version allows to change this.