User Yann reported problems with GIFTI files from CAT12. Error was eliminated when an uncorrected threshold was used. There must be some problem related to GIFTI (but not CIFTI, which has had more testing) data when no significant results are obtained.
However, Yann later reported that an error related to spm_mesh_max was thrown when an analysis did complete. That should be addressed by PR #187.
From: Yann Quidé <yannquide@gmail.com>
Date: Wed, Feb 3, 2021 at 2:12 AM
Subject: [SwE] Improper assignment with rectangular empty matrix
To: 'Sebastian Markett' via SwE-Toolbox Support <swe-toolbox@googlegroups.com>
Dear Tom and Bryan,
I have a longitudinal design (2 visits T1 and T2) for 3 groups (G1, n=19; G2, n=15; G3, n=10) on surface-based images (thickness, gyrification .gii files derived using the CAT12 toolbox). I’m using SwE v2.2.2.
I am interested in determining the effects of group, time, and their interaction.
Although I can successfully specify all my models, for some of them I get the below error when running them.
I never encountered this type of error before, do you have any idea what could be the reason and how to fix this?
Thanks for your time.
Yann
------------------------------------------------------------------------
01-Feb-2021 13:43:54 - Running job #1
------------------------------------------------------------------------
01-Feb-2021 13:43:54 - Running 'Run Model'
Initialising parameters : ...done
Output images : ...initialised
Original statistics: Chunk 1/1 : ...processing01-Feb-2021 13:45:08 - Failed 'Run Model'
Improper assignment with rectangular empty matrix.
In file "/mridata/workingdata/RUSE/spm12_cat12.6/toolbox/SwE-toolbox-2.2.2/swe_cp_WB.m" (???), function "swe_cp_WB" at line 1695.
In file "/mridata/workingdata/RUSE/spm12_cat12.6/toolbox/SwE-toolbox-2.2.2/swe_cp.m" (???), function "swe_cp" at line 75.
In file "/mridata/workingdata/RUSE/spm12_cat12.6/toolbox/SwE-toolbox-2.2.2/swe_run_rmodel.m" (???), function "swe_run_rmodel" at line 34.
The following modules did not run:
Failed: Run Model
User Yann reported problems with GIFTI files from CAT12. Error was eliminated when an uncorrected threshold was used. There must be some problem related to GIFTI (but not CIFTI, which has had more testing) data when no significant results are obtained.
However, Yann later reported that an error related to
spm_mesh_maxwas thrown when an analysis did complete. That should be addressed by PR #187.