search

NKI-AI / ahcore

Ahcore is the AI for Oncology core computational pathology toolkit
Apache License 2.0
15 stars 1 forks source link

H5 Writer for feature vectors. #54

Closed AjeyPaiK closed 7 months ago

AjeyPaiK commented 7 months ago

This PR adds:

  1. H5TileFeatureWriter to write feature vectors of WSI tiles to h5 files.

  2. The spatial configuration of the feature vectors correspond to the spatial configuration of their respective tiles in the WSI. Check below for a visual representation. image

  3. A test to check the new writer and its functions.

  4. This issue fixes #53

AjeyPaiK commented 7 months ago

We fix rest of the pre-commit in a different PR.