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NKI-AI / ahcore

Ahcore is the AI for Oncology core computational pathology toolkit
Apache License 2.0
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Implement a GaussianBlur in the readers during tile stitching. #97

Open AjeyPaiK opened 1 month ago

AjeyPaiK commented 1 month ago

Is your feature request related to a problem? Please describe. My segmentation outputs currently contain tiling artefacts. Even though StitchingMode.AVERAGE and StitchingMode.CROP have been implemented, StitchingMode.GAUSSIANBLUR is a desirable feature for ahcore.

image

Describe the solution you'd like Define an additional member in the StitchingMode and implement a gaussian smoothing on the overlap region between two tiles.

Describe alternatives you've considered N/A

Additional context N/A.

AjeyPaiK commented 1 month ago

I will first implment a StitchingMode.AVERAGE. Then, I will progress to implementing a gaussian blurring on each tile before stitched image is generated.