Finally done... both RNAseq and spatial pipelines use the same metadata file, that also serves as the input for Hanne's code.
The only methodological change is to fix an error in the TRUST report in which I multiplied by a normalization factor when I should have divided. This does not change the interpretation of the results (i.e., no changes in significance).
Finally done... both RNAseq and spatial pipelines use the same metadata file, that also serves as the input for Hanne's code.
The only methodological change is to fix an error in the TRUST report in which I multiplied by a normalization factor when I should have divided. This does not change the interpretation of the results (i.e., no changes in significance).