search

NKI-GCF / XenofilteR

Filtering of PDX samples for mouse derived reads
GNU General Public License v3.0
27 stars 7 forks source link

Bam with or without duplicate reads marked #22

Closed npatel-ah closed 2 years ago

npatel-ah commented 2 years ago

Hello,

Should I run XenofilteR after or before duplicate reads are marked ?

Thanks.

RoelKluin commented 2 years ago

Both are possible.

npatel-ah commented 2 years ago

Thank You.