search

NLPatVCU / medaCy

:hospital: Medical Text Mining and Information Extraction with spaCy
GNU General Public License v3.0
432 stars 91 forks source link

Is there a pretrained model supporting extraction of symptoms and diseases? #174

Open paulxshen opened 4 years ago

paulxshen commented 4 years ago

Is there a pretrained model supporting extraction of symptoms and diseases? Thanks!

swfarnsworth commented 4 years ago

Sorry for my delayed reply. I've been working with my colleagues to see if we have the data available to create this for you. I hope to be back with definitive information soon.

paulxshen commented 4 years ago

Thank you I appreciate it.

SULAMBERT commented 4 years ago

I would love to get this service. even if data is not available, can you show us with sample data how to train the pretrained model with disease and symptoms data?

swfarnsworth commented 4 years ago

@SULAMBERT I found a dataset online that could potentially be converted to BRAT format and used to train a model with medaCy. https://www.ncbi.nlm.nih.gov/CBBresearch/Dogan/DISEASE/

rbhambriiit commented 4 years ago

Sounds like a nice feature. Let me know if I can contribute in some way. I haven't used medaCy a lot but happy to collaborate and learn.