NLeSC MAGMa issues - Githubissues

NLeSC / MAGMa

eMetabolomics project: Mass Annotation based on in silico Generated Metabolites

http://www.emetabolomics.org

Apache License 2.0

14 stars 6 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Make MAGMa web python3 compatible

#255 ridderl opened 5 years ago
1
Update documentation about pubchem processing

#254 ridderl opened 7 years ago
0
line.peak style now darker

#253 jspaaks opened 8 years ago
1
replaced some instances of 'MS/MS' or 'MS' with 'LC-MS/MS'

#252 jspaaks opened 8 years ago
1
Light

#251 ridderl closed 8 years ago
1
MAGMa light

#250 ridderl closed 7 years ago
0
Implement online service for retrieving candidate molecules by magma job

#249 ridderl closed 7 years ago
0
239 remove cdk cactvs depencies

#248 ridderl closed 9 years ago
0
212 level 1 triangles

#247 sverhoeven closed 9 years ago
1
Travis ci

#246 sverhoeven closed 9 years ago
0
Remove requirement of commas before newlines in tree data format

#245 ridderl closed 9 years ago
0
cleanup / annotate job code

#244 ridderl closed 9 years ago
0
Log correct number of spectral trees in case of multiple precursors per scan (annotate)

#243 ridderl closed 9 years ago
0
Add inchikey14 and smiles column to molecule model

#242 sverhoeven closed 9 years ago
2
Add tests for magma job code

#241 ridderl closed 9 years ago
0
Add pubchem name/reference to all molecules

#240 sverhoeven closed 9 years ago
0
Check if current RDkit handles smirks correctly, and if so, implement

#239 ridderl closed 9 years ago
2
Merge metab_network branch to master

#238 sverhoeven closed 9 years ago
1
Standardized names

#237 sverhoeven closed 9 years ago
3
Cleanup jobs

#236 sverhoeven closed 9 years ago
2
Add login button to public website which shows login page, benefits and how to request access

#235 sverhoeven closed 9 years ago
2
Make MAGMa open source

#234 sverhoeven closed 9 years ago
4
Job failes with 'SSL3_GET_SERVER_CERTIFICATE:certificate verify failed'

#233 sverhoeven closed 10 years ago
2
User management script for magma web

#232 ridderl closed 9 years ago
2
Resolve peaks with identical m/z in one scan in read_ms_data

#231 ridderl opened 10 years ago
0
Redesign submit form 2 side by side

#230 sverhoeven closed 10 years ago
0
Improve feedback of failed jobs

#229 ridderl closed 10 years ago
6
Option to include halogenated compounds from databases

#228 ridderl closed 9 years ago
0
Lookup PubChem names/references for uploaded compounds and predicted metabolites

#227 ridderl closed 9 years ago
0
make cactvs location configurable in config file

#226 sverhoeven closed 10 years ago
1
help documentation update with ms and metabolize settings, reactions column

#225 sverhoeven closed 10 years ago
2
Callback url option for read_ms_data

#224 ridderl closed 10 years ago
0
Callback url option for metabolize

#223 ridderl closed 10 years ago
0
In case of multiple scans of the same precursor ion generate composite spectrum

#222 ridderl closed 10 years ago
5
Do not combine links in Reactions column with other filters

#221 ridderl closed 10 years ago
1
Allow entering MS2 scan numbers (as well as MS1)

#220 ridderl opened 10 years ago
0
Remove automatic selection of a single scan

#219 ridderl closed 10 years ago
1
Issue213

#218 sverhoeven closed 10 years ago
0
Issue 209 and 216

#217 sverhoeven closed 10 years ago
0
Remove "Generate metabolite options" from information panel

#216 ridderl closed 10 years ago
0
Export of metabolites to SDF doesn't work anymore?

#215 ridderl closed 10 years ago
0
Checkchange event was not fired.

#214 sverhoeven closed 10 years ago
0
Ask for login when linking to a results file

#213 ridderl closed 10 years ago
0
Show green triangles in Level 1 scan also when no candidate molecule is selected

#212 ridderl closed 9 years ago
32
Implement scenario into magma job interface

#211 ridderl closed 10 years ago
0
Metabolize options as editable grid as scenario

#210 sverhoeven closed 9 years ago
34
Enable metabolize options on homepage

#209 sverhoeven closed 10 years ago
1
Modify Reactions column in molecules grid

#208 ridderl closed 10 years ago
7
Add filter on metabolite id

#207 sverhoeven closed 10 years ago
0
Increase timeout of joblauncher so big jobs can finish

#206 sverhoeven closed 10 years ago
1