NLeSC / team-atlas

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Define analysis/plots required for the application notebook #241

Closed fnattino closed 3 years ago

fnattino commented 3 years ago

Send Raul links to available notebooks so that he can point out which analysis are still missing

fnattino commented 3 years ago

Collected the main notebooks which we have run in the past to perform the co-clustering analysis for the CONUS dataset (or a subset of it) and asked for feedback to Raul and Emma:

fnattino commented 3 years ago

Got feedback from Raul:

Feedback notebook eScience Academy. Figures [18] and [19]. Axis and color bar (legend) are unclear. If the data is reordered, how come both the x and y axis grow monotonically? The legend reaches values that are too high (225) and, as a result, the co-clusters are not clearly visible. Max and min of the legend should be similar to the ones used in figure [22]. K-means features need to be exposed. Selection of optimum K? (I wonder if a threshold is the best approach to identify the elbow vs change in slope?) Temporal patterns are not visible yet. Figures 8 and 10 from this publication No need to immediately implement those figures. Need to think about the case study.

fnattino commented 3 years ago

Fixed all issue apart from the discussion on the selection of optimum K in k-means, whiche requires also input from Emma.