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NMGRL / pychron

Data acquisition and processing framework for Ar-Ar geochronology and noble gas mass spectrometry
http://pychron.readthedocs.org/en/latest/
Apache License 2.0
26 stars 26 forks source link

unable to access IR938 data #1021

Closed wcmcintosh closed 7 years ago

wcmcintosh commented 7 years ago

project selected, but analyses do not appear in sample list

/Users/mcintosh/miniconda2/envs/pychron/bin/python /Users/mcintosh/Programming/git/pychron/launchers/pychron_dev.py
Archiver                                : 2016-11-22 16:32:04,825 INFO      (MainThread) Files older than 2016-11-08 16:32:04.825251 will be archived
Archiver                                : 2016-11-22 16:32:04,826 INFO      (MainThread) Archives older than 1 months will be deleted
Archiver                                : 2016-11-22 16:32:04,826 INFO      (MainThread) Archive cleaning complete
requests.packages.urllib3.connectionpool: 2016-11-22 16:32:04,983 INFO      (MainThread) Starting new HTTPS connection (1): api.github.com
requests.packages.urllib3.connectionpool: 2016-11-22 16:32:05,283 DEBUG     (MainThread) "GET / HTTP/1.1" 200 None
traits.interface_checker                : 2016-11-22 16:32:05,330 WARNING   (MainThread) The 'HeadingText' class does not implement the 'image' trait(s) of the 'IHeadingText' interface.
traits.interface_checker                : 2016-11-22 16:32:05,382 WARNING   (MainThread) The 'Application' class does not implement the 'unregistered', 'registered' trait(s) of the 'IApplication' interface.
root                                    : 2016-11-22 16:32:05,970 WARNING   (MainThread) ****** ProcessingPlugin not a valid plugin name******
no icon for "database-save.png"
envisage.plugin                         : 2016-11-22 16:32:06,085 WARNING   (MainThread) plugin <pychron.entry.tasks.entry_plugin.EntryPlugin object at 0x1183abf50> has no name - using <Entry Plugin>
envisage.plugin                         : 2016-11-22 16:32:06,984 WARNING   (MainThread) plugin <pychron.loading.tasks.loading_plugin.LoadingPlugin object at 0x1183f6470> has no name - using <Loading Plugin>
traits.interface_checker                : 2016-11-22 16:32:07,338 WARNING   (MainThread) The 'GitHostService' class signature for the 'make_url' method is different from that of the 'IGitHost' interface.
no icon for "checkout.png"
no icon for "resume.png"
envisage.plugin                         : 2016-11-22 16:32:08,838 WARNING   (MainThread) plugin <pychron.pipeline.tasks.plugin.PipelinePlugin object at 0x12100fe30> has no name - using <Pipeline Plugin>
apptools.preferences.preferences        : 2016-11-22 16:32:08,865 DEBUG     (MainThread) loading preferences from </Users/mcintosh/.enthought/pychron.experiment.application.root/preferences.ini>
envisage.plugin                         : 2016-11-22 16:32:08,877 WARNING   (MainThread) plugin <pychron.dvc.tasks.dvc_plugin.DVCPlugin object at 0x11e0e9170> has no Id - using <pychron.dvc.tasks.dvc_plugin.DVCPlugin>
envisage.plugin                         : 2016-11-22 16:32:08,877 WARNING   (MainThread) plugin <pychron.pipeline.tasks.plugin.PipelinePlugin object at 0x12100fe30> has no Id - using <pychron.pipeline.tasks.plugin.PipelinePlugin>
envisage.plugin                         : 2016-11-22 16:32:08,877 WARNING   (MainThread) plugin <pychron.git.tasks.github_plugin.GitHubPlugin object at 0x1214eeef0> has no Id - using <pychron.git.tasks.github_plugin.GitHubPlugin>
envisage.provider_extension_registry    : 2016-11-22 16:32:08,882 DEBUG     (MainThread) extensions to <pychron.actions> <[[], [], [], [], [], [('pychron.labnumber_entry', 'Ctrl+Shift+l', 'Open Labnumber Entry Window'), ('pychron.sensitivity', 'Ctrl+Shift+\\', 'Open Sensistivity Window')], [], [], [], [], [], [], []]>
envisage.ui.tasks.tasks_application     : 2016-11-22 16:32:08,966 DEBUG     (MainThread) Tasks state location is /Users/mcintosh/.enthought/pychron.experiment.application.root/tasks/qt4
envisage.provider_extension_registry    : 2016-11-22 16:32:08,972 DEBUG     (MainThread) extensions to <envisage.ui.tasks.tasks> <[[], [], [], [<envisage.ui.tasks.task_factory.TaskFactory object at 0x1216cb410>], [<envisage.ui.tasks.task_factory.TaskFactory object at 0x1216cb950>], [<envisage.ui.tasks.task_factory.TaskFactory object at 0x1216cb9b0>, <envisage.ui.tasks.task_factory.TaskFactory object at 0x1216cba10>, <envisage.ui.tasks.task_factory.TaskFactory object at 0x1216cba70>, <envisage.ui.tasks.task_factory.TaskFactory object at 0x1216cbad0>, <envisage.ui.tasks.task_factory.TaskFactory object at 0x1216cbb30>], [], [<envisage.ui.tasks.task_factory.TaskFactory object at 0x1216cbb90>], [<envisage.ui.tasks.task_factory.TaskFactory object at 0x1216cbbf0>], [<envisage.ui.tasks.task_factory.TaskFactory object at 0x1216cbc50>], [], [], []]>
envisage.provider_extension_registry    : 2016-11-22 16:32:09,008 DEBUG     (MainThread) extensions to <envisage.ui.tasks.task_extensions> <[[], [<envisage.ui.tasks.task_extension.TaskExtension object at 0x1216cbe90>], [<envisage.ui.tasks.task_extension.TaskExtension object at 0x1216cbf50>], [<envisage.ui.tasks.task_extension.TaskExtension object at 0x1216dd0b0>], [], [<envisage.ui.tasks.task_extension.TaskExtension object at 0x1216dd890>, <envisage.ui.tasks.task_extension.TaskExtension object at 0x1216dd8f0>, <envisage.ui.tasks.task_extension.TaskExtension object at 0x1216ddad0>], [], [<envisage.ui.tasks.task_extension.TaskExtension object at 0x1216ddc50>], [<envisage.ui.tasks.task_extension.TaskExtension object at 0x1216ddd70>], [<envisage.ui.tasks.task_extension.TaskExtension object at 0x1216e8710>, <envisage.ui.tasks.task_extension.TaskExtension object at 0x1216e8770>], [], [], []]>
libpng warning: iCCP: known incorrect sRGB profile
envisage.application                    : 2016-11-22 16:32:09,294 DEBUG     (MainThread) ---------- application starting ----------
envisage.plugin_manager                 : 2016-11-22 16:32:09,295 DEBUG     (MainThread) plugin envisage.core starting
envisage.provider_extension_registry    : 2016-11-22 16:32:09,298 DEBUG     (MainThread) extensions to <envisage.preferences> <[[], [], [], [], [], [], [], [], ['file:///Users/mcintosh/Pychron_dev/preferences/dvc.ini'], [], [], ['file:///Users/mcintosh/Pychron_dev/preferences/update.ini'], []]>
apptools.preferences.preferences        : 2016-11-22 16:32:09,304 DEBUG     (MainThread) loading preferences from <<open file '/Users/mcintosh/Pychron_dev/preferences/dvc.ini', mode 'rb' at 0x12169c9c0>>
apptools.preferences.preferences        : 2016-11-22 16:32:09,305 DEBUG     (MainThread) loading preferences from <<open file '/Users/mcintosh/Pychron_dev/preferences/update.ini', mode 'rb' at 0x12169c930>>
envisage.provider_extension_registry    : 2016-11-22 16:32:09,319 DEBUG     (MainThread) extensions to <envisage.class_load_hooks> <[[], [], [], [], [], [], [], [], [], [], [], [], []]>
envisage.provider_extension_registry    : 2016-11-22 16:32:09,332 DEBUG     (MainThread) extensions to <envisage.categories> <[[], [], [], [], [], [], [], [], [], [], [], [], []]>
envisage.provider_extension_registry    : 2016-11-22 16:32:09,337 DEBUG     (MainThread) extensions to <envisage.service_offers> <[[], [<envisage.service_offer.ServiceOffer object at 0x123ea9bf0>], [], [], [], [<envisage.service_offer.ServiceOffer object at 0x123ea9d10>, <envisage.service_offer.ServiceOffer object at 0x123ea9cb0>], [], [<envisage.service_offer.ServiceOffer object at 0x123ea9d70>, <envisage.service_offer.ServiceOffer object at 0x123ea9e90>, <envisage.service_offer.ServiceOffer object at 0x123ea9ef0>], [<envisage.service_offer.ServiceOffer object at 0x123edb830>, <envisage.service_offer.ServiceOffer object at 0x123edb890>], [<envisage.service_offer.ServiceOffer object at 0x123edb8f0>, <envisage.service_offer.ServiceOffer object at 0x123edb950>], [<envisage.service_offer.ServiceOffer object at 0x123edb9b0>], [<envisage.service_offer.ServiceOffer object at 0x123edba10>], [<envisage.service_offer.ServiceOffer object at 0x123edba70>, <envisage.service_offer.ServiceOffer object at 0x123edbad0>]]>
envisage.service_registry               : 2016-11-22 16:32:09,337 DEBUG     (MainThread) service <1> registered envisage.ui.tasks.preferences_dialog.PreferencesDialog
envisage.service_registry               : 2016-11-22 16:32:09,338 DEBUG     (MainThread) service <2> registered pychron.entry.editors.molecular_weight_editor.MolecularWeightEditor
envisage.service_registry               : 2016-11-22 16:32:09,338 DEBUG     (MainThread) service <3> registered pychron.entry.editors.flux_monitor_editor.FluxMonitorEditor
envisage.service_registry               : 2016-11-22 16:32:09,338 DEBUG     (MainThread) service <4> registered pychron.loading.tasks.panes.LoadDockPane
envisage.service_registry               : 2016-11-22 16:32:09,338 DEBUG     (MainThread) service <5> registered pychron.loading.tasks.panes.LoadTablePane
envisage.service_registry               : 2016-11-22 16:32:09,338 DEBUG     (MainThread) service <6> registered pychron.loading.loading_manager.LoadingManager
envisage.service_registry               : 2016-11-22 16:32:09,339 DEBUG     (MainThread) service <7> registered pychron.dvc.dvc_persister.DVCPersister
envisage.service_registry               : 2016-11-22 16:32:09,339 DEBUG     (MainThread) service <8> registered pychron.dvc.dvc.DVC
envisage.service_registry               : 2016-11-22 16:32:09,339 DEBUG     (MainThread) service <9> registered pychron.envisage.browser.sample_browser_model.SampleBrowserModel
envisage.service_registry               : 2016-11-22 16:32:09,339 DEBUG     (MainThread) service <10> registered pychron.envisage.browser.interpreted_age_browser_model.InterpretedAgeBrowserModel
envisage.service_registry               : 2016-11-22 16:32:09,339 DEBUG     (MainThread) service <11> registered pychron.git.hosts.IGitHost
envisage.service_registry               : 2016-11-22 16:32:09,339 DEBUG     (MainThread) service <12> registered pychron.updater.updater.Updater
envisage.service_registry               : 2016-11-22 16:32:09,340 DEBUG     (MainThread) service <13> registered pychron.mass_spec.database.massspec_database_adapter.MassSpecDatabaseAdapter
envisage.service_registry               : 2016-11-22 16:32:09,340 DEBUG     (MainThread) service <14> registered pychron.mass_spec.mass_spec_recaller.MassSpecRecaller
envisage.plugin_manager                 : 2016-11-22 16:32:09,340 DEBUG     (MainThread) plugin envisage.core started
envisage.plugin_manager                 : 2016-11-22 16:32:09,340 DEBUG     (MainThread) plugin envisage.ui.tasks starting
envisage.plugin_manager                 : 2016-11-22 16:32:09,341 DEBUG     (MainThread) plugin envisage.ui.tasks started
envisage.plugin_manager                 : 2016-11-22 16:32:09,341 DEBUG     (MainThread) plugin pychron.tasks.plugin starting
Tasks                                   : 2016-11-22 16:32:09,341 INFO      (MainThread) Writing plugin file defaults
envisage.provider_extension_registry    : 2016-11-22 16:32:09,346 DEBUG     (MainThread) extensions to <pychron.plugin.file_defaults> <[[], [], [], [], [], [], [], [], [], [['pipeline_template_file', 'PIPELINE_TEMPLATES', False], ['icfactor_template', 'ICFACTOR', False], ['blanks_template', 'BLANKS', False], ['iso_evo_template', 'ISOEVO', False], ['ideogram_template', 'IDEO', False], ['spectrum_template', 'SPEC', False], ['series_template', 'SERIES', False], ['inverse_isochron_template', 'INVERSE_ISOCHRON', False], ['csv_ideogram_template', 'CSV_IDEO', False], ['flux_template', 'FLUX', False], ['vertical_flux_template', 'VERTICAL_FLUX', False], ['xy_scatter_template', 'XY_SCATTER', False], ['analysis_table_template', 'ANALYSIS_TABLE', False], ['interpreted_age_table_template', 'INTERPRETED_AGE_TABLE', False], ['auto_ideogram_template', 'AUTO_IDEOGRAM', False], ['geochron_template', 'GEOCHRON', False], ['yield_template', 'YIELD', False]], [], [], []]>
envisage.plugin_manager                 : 2016-11-22 16:32:09,347 DEBUG     (MainThread) plugin pychron.tasks.plugin started
envisage.plugin_manager                 : 2016-11-22 16:32:09,347 DEBUG     (MainThread) plugin pychron.logger starting
Logger                                  : 2016-11-22 16:32:09,347 DEBUG     (MainThread) doing start up tests
StartupTester                           : 2016-11-22 16:32:09,348 DEBUG     (MainThread) ------------ Plugin "Logger" not in startup_tests.yaml
StartupTester                           : 2016-11-22 16:32:09,348 DEBUG     (MainThread) Database,LabBook,ArArConstants,ArgusSpectrometer,ExtractionLine
StartupTester                           : 2016-11-22 16:32:09,348 DEBUG     (MainThread) ---------------------------------------------------------------
StartupTester                           : 2016-11-22 16:32:09,348 DEBUG     (MainThread) No tests for Logger
envisage.plugin_manager                 : 2016-11-22 16:32:09,348 DEBUG     (MainThread) plugin pychron.logger started
envisage.plugin_manager                 : 2016-11-22 16:32:09,348 DEBUG     (MainThread) plugin pychron.users.plugin starting
Users                                   : 2016-11-22 16:32:09,349 DEBUG     (MainThread) doing start up tests
StartupTester                           : 2016-11-22 16:32:09,349 DEBUG     (MainThread) ------------ Plugin "Users" not in startup_tests.yaml
StartupTester                           : 2016-11-22 16:32:09,349 DEBUG     (MainThread) Database,LabBook,ArArConstants,ArgusSpectrometer,ExtractionLine
StartupTester                           : 2016-11-22 16:32:09,349 DEBUG     (MainThread) ---------------------------------------------------------------
StartupTester                           : 2016-11-22 16:32:09,349 DEBUG     (MainThread) No tests for Users
envisage.plugin_manager                 : 2016-11-22 16:32:09,349 DEBUG     (MainThread) plugin pychron.users.plugin started
envisage.plugin_manager                 : 2016-11-22 16:32:09,349 DEBUG     (MainThread) plugin pychron.entry.plugin starting
Entry Plugin                            : 2016-11-22 16:32:09,350 DEBUG     (MainThread) doing start up tests
StartupTester                           : 2016-11-22 16:32:09,350 DEBUG     (MainThread) ------------ Plugin "Entry Plugin" not in startup_tests.yaml
StartupTester                           : 2016-11-22 16:32:09,350 DEBUG     (MainThread) Database,LabBook,ArArConstants,ArgusSpectrometer,ExtractionLine
StartupTester                           : 2016-11-22 16:32:09,350 DEBUG     (MainThread) ---------------------------------------------------------------
StartupTester                           : 2016-11-22 16:32:09,350 DEBUG     (MainThread) No tests for Entry Plugin
envisage.plugin_manager                 : 2016-11-22 16:32:09,350 DEBUG     (MainThread) plugin pychron.entry.plugin started
envisage.plugin_manager                 : 2016-11-22 16:32:09,351 DEBUG     (MainThread) plugin pychron.arar_constants starting
ArArConstants                           : 2016-11-22 16:32:09,351 DEBUG     (MainThread) doing start up tests
StartupTester                           : 2016-11-22 16:32:09,351 DEBUG     (MainThread) ------------ Plugin "ArArConstants" not in startup_tests.yaml
StartupTester                           : 2016-11-22 16:32:09,351 DEBUG     (MainThread) Database,LabBook,ArArConstants,ArgusSpectrometer,ExtractionLine
StartupTester                           : 2016-11-22 16:32:09,352 DEBUG     (MainThread) ---------------------------------------------------------------
StartupTester                           : 2016-11-22 16:32:09,352 DEBUG     (MainThread) No tests for ArArConstants
envisage.plugin_manager                 : 2016-11-22 16:32:09,352 DEBUG     (MainThread) plugin pychron.arar_constants started
envisage.plugin_manager                 : 2016-11-22 16:32:09,352 DEBUG     (MainThread) plugin pychron.loading starting
Loading Plugin                          : 2016-11-22 16:32:09,352 DEBUG     (MainThread) doing start up tests
StartupTester                           : 2016-11-22 16:32:09,353 DEBUG     (MainThread) ------------ Plugin "Loading Plugin" not in startup_tests.yaml
StartupTester                           : 2016-11-22 16:32:09,353 DEBUG     (MainThread) Database,LabBook,ArArConstants,ArgusSpectrometer,ExtractionLine
StartupTester                           : 2016-11-22 16:32:09,353 DEBUG     (MainThread) ---------------------------------------------------------------
StartupTester                           : 2016-11-22 16:32:09,353 DEBUG     (MainThread) No tests for Loading Plugin
envisage.plugin_manager                 : 2016-11-22 16:32:09,353 DEBUG     (MainThread) plugin pychron.loading started
envisage.plugin_manager                 : 2016-11-22 16:32:09,353 DEBUG     (MainThread) plugin pychron.dvc.tasks.dvc_plugin.DVCPlugin starting
DVC                                     : 2016-11-22 16:32:09,354 DEBUG     (MainThread) doing start up tests
StartupTester                           : 2016-11-22 16:32:09,354 DEBUG     (MainThread) ------------ Plugin "DVC" not in startup_tests.yaml
StartupTester                           : 2016-11-22 16:32:09,354 DEBUG     (MainThread) Database,LabBook,ArArConstants,ArgusSpectrometer,ExtractionLine
StartupTester                           : 2016-11-22 16:32:09,354 DEBUG     (MainThread) ---------------------------------------------------------------
StartupTester                           : 2016-11-22 16:32:09,354 DEBUG     (MainThread) No tests for DVC
DVC                                     : 2016-11-22 16:32:09,357 DEBUG     (MainThread) Initialize DVC
DVC                                     : 2016-11-22 16:32:09,358 DEBUG     (MainThread) open meta repo /Users/mcintosh/Pychron_dev/data/.dvc/MetaData
DVC                                     : 2016-11-22 16:32:09,358 DEBUG     (MainThread) Opening Meta Repo
MetaData<GitRepo>                       : 2016-11-22 16:32:09,949 DEBUG     (MainThread) Smart pull ahead: 15 behind: 0
MetaData<GitRepo>                       : 2016-11-22 16:32:09,949 DEBUG     (MainThread) Up-to-date with origin
pychronmeta                             : 2016-11-22 16:32:09,972 INFO      (MainThread) using pymysql
pychronmeta                             : 2016-11-22 16:32:09,972 INFO      (MainThread) 4897750480 connecting to database mysql+pymysql://wmcintosh:Wmcintosh40*39@129.138.12.160/pychrondvc?connect_timeout=5
pychronmeta                             : 2016-11-22 16:32:09,992 DEBUG     (MainThread) create new session 4897750480
pychronmeta                             : 2016-11-22 16:32:09,993 INFO      (MainThread) testing database connection get_migrate_version
pychronmeta                             : 2016-11-22 16:32:10,148 INFO      (MainThread) closing test session
pychronmeta                             : 2016-11-22 16:32:10,149 DEBUG     (MainThread) close session 4897750480
pychronmeta                             : 2016-11-22 16:32:10,150 INFO      (MainThread) connected to db mysql+pymysql://wmcintosh:Wmcintosh40*39@129.138.12.160/pychrondvc?connect_timeout=5
envisage.plugin_manager                 : 2016-11-22 16:32:10,152 DEBUG     (MainThread) plugin pychron.dvc.tasks.dvc_plugin.DVCPlugin started
envisage.plugin_manager                 : 2016-11-22 16:32:10,152 DEBUG     (MainThread) plugin pychron.pipeline.tasks.plugin.PipelinePlugin starting
Pipeline Plugin                         : 2016-11-22 16:32:10,152 DEBUG     (MainThread) doing start up tests
StartupTester                           : 2016-11-22 16:32:10,153 DEBUG     (MainThread) ------------ Plugin "Pipeline Plugin" not in startup_tests.yaml
StartupTester                           : 2016-11-22 16:32:10,153 DEBUG     (MainThread) Database,LabBook,ArArConstants,ArgusSpectrometer,ExtractionLine
StartupTester                           : 2016-11-22 16:32:10,153 DEBUG     (MainThread) ---------------------------------------------------------------
StartupTester                           : 2016-11-22 16:32:10,153 DEBUG     (MainThread) No tests for Pipeline Plugin
envisage.plugin_manager                 : 2016-11-22 16:32:10,153 DEBUG     (MainThread) plugin pychron.pipeline.tasks.plugin.PipelinePlugin started
envisage.plugin_manager                 : 2016-11-22 16:32:10,154 DEBUG     (MainThread) plugin pychron.git.tasks.github_plugin.GitHubPlugin starting
GitHub                                  : 2016-11-22 16:32:10,154 DEBUG     (MainThread) user=wcmcintosh, pwd=Argon4181, token=None
envisage.plugin_manager                 : 2016-11-22 16:32:10,154 DEBUG     (MainThread) plugin pychron.git.tasks.github_plugin.GitHubPlugin started
envisage.plugin_manager                 : 2016-11-22 16:32:10,154 DEBUG     (MainThread) plugin pychron.update.plugin starting
Update                                  : 2016-11-22 16:32:10,154 DEBUG     (MainThread) doing start up tests
StartupTester                           : 2016-11-22 16:32:10,155 DEBUG     (MainThread) ------------ Plugin "Update" not in startup_tests.yaml
StartupTester                           : 2016-11-22 16:32:10,155 DEBUG     (MainThread) Database,LabBook,ArArConstants,ArgusSpectrometer,ExtractionLine
StartupTester                           : 2016-11-22 16:32:10,155 DEBUG     (MainThread) ---------------------------------------------------------------
StartupTester                           : 2016-11-22 16:32:10,155 DEBUG     (MainThread) No tests for Update
envisage.plugin_manager                 : 2016-11-22 16:32:10,157 DEBUG     (MainThread) plugin pychron.update.plugin started
envisage.plugin_manager                 : 2016-11-22 16:32:10,158 DEBUG     (MainThread) plugin pychron.mass_spec.plugin starting
MassSpec                                : 2016-11-22 16:32:10,158 DEBUG     (MainThread) doing start up tests
StartupTester                           : 2016-11-22 16:32:10,158 DEBUG     (MainThread) ------------ Plugin "MassSpec" not in startup_tests.yaml
StartupTester                           : 2016-11-22 16:32:10,159 DEBUG     (MainThread) Database,LabBook,ArArConstants,ArgusSpectrometer,ExtractionLine
StartupTester                           : 2016-11-22 16:32:10,159 DEBUG     (MainThread) ---------------------------------------------------------------
StartupTester                           : 2016-11-22 16:32:10,159 DEBUG     (MainThread) No tests for MassSpec
envisage.plugin_manager                 : 2016-11-22 16:32:10,159 DEBUG     (MainThread) plugin pychron.mass_spec.plugin started
envisage.application                    : 2016-11-22 16:32:10,160 DEBUG     (MainThread) ---------- application started ----------
pyface.ui.qt4.gui                       : 2016-11-22 16:32:10,398 DEBUG     (MainThread) ---------- starting GUI event loop ----------
PipelineEngine                          : 2016-11-22 16:32:25,004 DEBUG     (MainThread) load predefined templates
PipelineEngine                          : 2016-11-22 16:32:25,005 DEBUG     (MainThread) loaded 0 user templates
pychronmeta                             : 2016-11-22 16:32:25,237 DEBUG     (MainThread) create new session 4897750480
DVC                                     : 2016-11-22 16:32:25,487 DEBUG     (MainThread) Initialize DVC
DVC                                     : 2016-11-22 16:32:25,487 DEBUG     (MainThread) open meta repo /Users/mcintosh/Pychron_dev/data/.dvc/MetaData
DVC                                     : 2016-11-22 16:32:25,487 DEBUG     (MainThread) Opening Meta Repo
PipelineEngine                          : 2016-11-22 16:32:29,514 DEBUG     (MainThread) Pipeline template Isotope Evolutions selected
Pipeline Data Processing                : 2016-11-22 16:32:32,007 DEBUG     (MainThread) run pipeline started
pychronmeta                             : 2016-11-22 16:32:32,007 DEBUG     (MainThread) create new session 4897750480
PipelineEngine                          : 2016-11-22 16:32:32,008 DEBUG     (MainThread) pipeline run started
SampleBrowserModel                      : 2016-11-22 16:32:32,162 DEBUG     (MainThread) ***************** loading
SampleBrowserModel                      : 2016-11-22 16:32:32,162 DEBUG     (MainThread) /Users/mcintosh/Pychron_dev/.hidden/browser_options.root
SampleBrowserModel                      : 2016-11-22 16:32:32,162 DEBUG     (MainThread) loading /Users/mcintosh/Pychron_dev/.hidden/browser_options.root
SampleBrowserModel                      : 2016-11-22 16:32:32,169 DEBUG     (MainThread) ***************** loading pickled object
SampleBrowserModel                      : 2016-11-22 16:32:32,169 DEBUG     (MainThread) setting project_enabled to True
SampleBrowserModel                      : 2016-11-22 16:32:32,169 DEBUG     (MainThread) setting repository_enabled to True
SampleBrowserModel                      : 2016-11-22 16:32:32,169 DEBUG     (MainThread) setting principal_investigator_enabled to False
SampleBrowserModel                      : 2016-11-22 16:32:32,301 DEBUG     (MainThread) setting sample_view_active to True
SampleBrowserModel                      : 2016-11-22 16:32:32,301 DEBUG     (MainThread) setting use_low_post to False
SampleBrowserModel                      : 2016-11-22 16:32:32,301 DEBUG     (MainThread) setting use_high_post to False
SampleBrowserModel                      : 2016-11-22 16:32:32,301 DEBUG     (MainThread) setting use_named_date_range to True
SampleBrowserModel                      : 2016-11-22 16:32:32,301 DEBUG     (MainThread) setting named_date_range to this month
SampleBrowserModel                      : 2016-11-22 16:32:32,301 DEBUG     (MainThread) setting low_post to 2016-10-31 00:00:00.671203
SampleBrowserModel                      : 2016-11-22 16:32:32,301 DEBUG     (MainThread) setting high_post to 2016-11-22 16:30:33.672525
SampleBrowserModel                      : 2016-11-22 16:32:32,302 DEBUG     (MainThread) setting irradiation_enabled to False
SampleBrowserModel                      : 2016-11-22 16:32:32,302 DEBUG     (MainThread) setting use_focus_switching to True
pychronmeta                             : 2016-11-22 16:32:32,303 DEBUG     (MainThread) SELECT `PrincipalInvestigatorTbl`.id, `PrincipalInvestigatorTbl`.affiliation, `PrincipalInvestigatorTbl`.email, `PrincipalInvestigatorTbl`.last_name, `PrincipalInvestigatorTbl`.first_initial 
FROM `PrincipalInvestigatorTbl` ORDER BY `PrincipalInvestigatorTbl`.last_name ASC
Inspection                              : 2016-11-22 16:32:32,810 DEBUG     (MainThread) _load_projects_and_irradiations called by activate_browser. parent call=<pychron.envisage.browser.sample_browser_model.SampleBrowserModel object at 0x1260d2a70> self._load_projects_and_irradiations()
SampleBrowserModel                      : 2016-11-22 16:32:32,810 DEBUG     (MainThread) load_projects_and_irradiations
SampleBrowserModel                      : 2016-11-22 16:32:32,923 DEBUG     (MainThread) $$$$$$$$$$$$$$$$$$$$$ Loading browser selection
SampleBrowserModel                      : 2016-11-22 16:32:32,924 DEBUG     (MainThread) bbmodel selected projects=['IR938']
SampleBrowserModel                      : 2016-11-22 16:32:32,932 DEBUG     (MainThread) set posts lp=2016-10-14 05:42:17 hp=2016-10-20 17:30:32
Inspection                              : 2016-11-22 16:32:32,935 DEBUG     (MainThread) _load_associated_labnumbers called by _selected_projects_changed. parent call=<pychron.envisage.browser.sample_browser_model.SampleBrowserModel object at 0x1260d2a70> self._load_associated_labnumbers()
Inspection                              : 2016-11-22 16:32:32,937 DEBUG     (MainThread) _make_labnumbers called by _load_associated_labnumbers. parent call=<pychron.envisage.browser.sample_browser_model.SampleBrowserModel object at 0x1260d2a70> sams.extend(self._make_labnumbers())
SampleBrowserModel                      : 2016-11-22 16:32:32,937 DEBUG     (MainThread) GET HPOST=2016-11-22 16:32:32.937582
SampleBrowserModel                      : 2016-11-22 16:32:32,937 DEBUG     (MainThread) GET LPOST=2016-10-31 00:00:00.937740
pychronmeta                             : 2016-11-22 16:32:32,937 DEBUG     (MainThread) ------- Get Labnumbers -------
pychronmeta                             : 2016-11-22 16:32:32,938 DEBUG     (MainThread) ------- principal_investigators: None
pychronmeta                             : 2016-11-22 16:32:32,938 DEBUG     (MainThread) ------- projects: ['IR938']
pychronmeta                             : 2016-11-22 16:32:32,938 DEBUG     (MainThread) ------- experiments: None
pychronmeta                             : 2016-11-22 16:32:32,938 DEBUG     (MainThread) ------- mass_spectrometers: []
pychronmeta                             : 2016-11-22 16:32:32,938 DEBUG     (MainThread) ------- irradiation: None
pychronmeta                             : 2016-11-22 16:32:32,938 DEBUG     (MainThread) ------- level: None
pychronmeta                             : 2016-11-22 16:32:32,938 DEBUG     (MainThread) ------- analysis_types: None
pychronmeta                             : 2016-11-22 16:32:32,938 DEBUG     (MainThread) ------- high_post: 2016-11-22 16:32:32.937582
pychronmeta                             : 2016-11-22 16:32:32,938 DEBUG     (MainThread) ------- low_post: 2016-10-31 00:00:00.937740
pychronmeta                             : 2016-11-22 16:32:32,938 DEBUG     (MainThread) ------------------------------
pychronmeta                             : 2016-11-22 16:32:32,942 DEBUG     (MainThread) SELECT DISTINCT `IrradiationPositionTbl`.id, `IrradiationPositionTbl`.identifier, `IrradiationPositionTbl`.`sampleID`, `IrradiationPositionTbl`.`levelID`, `IrradiationPositionTbl`.position, `IrradiationPositionTbl`.note, `IrradiationPositionTbl`.weight, `IrradiationPositionTbl`.j, `IrradiationPositionTbl`.j_err 
FROM `IrradiationPositionTbl` JOIN `SampleTbl` ON `SampleTbl`.id = `IrradiationPositionTbl`.`sampleID` JOIN `ProjectTbl` ON `ProjectTbl`.id = `SampleTbl`.`projectID` JOIN `AnalysisTbl` ON `IrradiationPositionTbl`.id = `AnalysisTbl`.`irradiation_positionID` 
WHERE `ProjectTbl`.name IN (IR938) AND `AnalysisTbl`.timestamp >= 2016-10-31 00:00:00.937740 AND `AnalysisTbl`.timestamp <= 2016-11-22 16:32:32.937582
SampleBrowserModel                      : 2016-11-22 16:32:32,950 DEBUG     (MainThread) No labnumbers
SampleBrowserModel                      : 2016-11-22 16:32:32,950 DEBUG     (MainThread) load associated analysis groups for ['IR938']
no icon for ".png"
SampleBrowserModel                      : 2016-11-22 16:32:33,037 DEBUG     (MainThread) $$$$$$$$$$$$$$$$$$$$$ Dumping browser selection
2016-11-22 16:32:49.635 python[13270:4639395] modalSession has been exited prematurely - check for a reentrant call to endModalSession:
no icon for ".png"
2016-11-22 16:32:52.250 python[13270:4639395] modalSession has been exited prematurely - check for a reentrant call to endModalSession:
PipelineEngine                          : 2016-11-22 16:32:52,251 DEBUG     (MainThread) 00: Unknowns<UnknownNode> Runtime: 2.6133
apptools.sweet_pickle.versioned_unpickler: 2016-11-22 16:32:52,252 DEBUG     (MainThread) VersionedUnpickler [<apptools.sweet_pickle.versioned_unpickler.VersionedUnpickler object at 0x12af35650>] using Updater [<apptools.sweet_pickle.updater.Updater object at 0x12af35410>]
apptools.sweet_pickle.versioned_unpickler: 2016-11-22 16:32:52,253 DEBUG     (MainThread) VersionedUnpickler [<apptools.sweet_pickle.versioned_unpickler.VersionedUnpickler object at 0x12af35650>] using Updater [<apptools.sweet_pickle.updater.Updater object at 0x12af35410>]
2016-11-22 16:32:55.336 python[13270:4639395] modalSession has been exited prematurely - check for a reentrant call to endModalSession:
PipelineEngine                          : 2016-11-22 16:32:55,337 DEBUG     (MainThread) Pre run failed Fit IsoEvo<FitIsotopeEvolutionNode>
Pipeline Data Processing                : 2016-11-22 16:32:55,337 DEBUG     (MainThread) true run pipeline run_pipeline
Pipeline Data Processing                : 2016-11-22 16:32:55,338 DEBUG     (MainThread) run pipeline finished
wcmcintosh commented 7 years ago

no error message, but no action either