Two issues with the latest workfflow

[JianpingHuang-NOAA]

@chan-hoo @bbakernoa I reported two issues with the recent and latest online-cmaq workflow

1) I checked out the online-cmaq branch from https://github.com/ufs-community/ufs-srweather-app/tree/online-cmaq (a43a9b0) committed on Dec. 22, and noticed that PM2.5 simulations are the same no matter I turn on or off the following line in config.yaml or I change alpha value in the aqm.rc file

DO_AQM_DUST: true

My workflow/ush dir can be found on Cactus /lfs/h2/emc/physics/noscrub/jianping.huang/nwdev/packages/aqm.v7.0.33/ush

It works well before you changed "fengsha" to "dust". I can see the difference of PM2.5 predictions when I turned on/off Fengsha and changed values of alpha (e.g., 15, 10, 5, 3). However, I did not see that change after the "Fengsha" was changed to "Dust". The code runs successfully, but the values are identical to the ones with the CMAQ default dust module.

2) I checked out the latest online-cmaq workflow (hash=30279101) this afternoon, and noticed that the workflow does not trigger the jobs successfully. Below is the part of information with the log.launch_FV3LAM_wflow (/lfs/h2/emc/aqmtemp/para/c46/20220718_19)

Output of rocotostat_cmd is:

       CYCLE                    TASK                       JOBID               STATE         EXIT STATUS     TRIES      DURATION
================================================================================================================================
202207181200           nexus_gfs_sfc                           -                   -                   -         -             -
202207181200       nexus_emission_00                           -                   -                   -         -             -
202207181200       nexus_emission_01                           -                   -                   -         -             -
202207181200       nexus_emission_02                           -                   -                   -         -             -
202207181200        nexus_post_split                           -                   -                   -         -             -
202207181200           fire_emission                    27397159             RUNNING                   -         0           0.0
202207181200           get_extrn_ics                           -                   -                   -         -             -
202207181200          get_extrn_lbcs                           -                   -                   -         -             -
202207181200                make_ics                           -                   -                   -         -             -
202207181200               make_lbcs                           -                   -                   -         -             -
202207181200             aqm_ics_ext                           -                   -                   -         -             -
202207181200                aqm_lbcs                           -                   -                   -         -             -
202207181200                run_fcst                           -                   -                   -         -             -
================================================================================================================================
202207191200           nexus_gfs_sfc                           -                   -                   -         -             -
202207191200       nexus_emission_00                           -                   -                   -         -             -
202207191200       nexus_emission_01                           -                   -                   -         -             -
202207191200       nexus_emission_02                           -                   -                   -         -             -
202207191200        nexus_post_split                           -                   -                   -         -             -
202207191200           fire_emission                    27397160             RUNNING                   -         0           0.0
4;mclogin01:/lfs/h2/emc/aqmtemp/para/c46/20220718_19 > pwd

I checked my crontab file and noticed that the following line is included correctly.

*/3 * * * * cd /lfs/h2/emc/physics/noscrub/jianping.huang/nwdev/packages/expt_dirs/ufs_na_rt_c22/2023010312 && ./launch_FV3LAM_wflow.sh called_from_cron="TRUE" >> ./log.launch_FV3LAM_wflow 2>&1

I did submit "launch_FV3LAM_wflow.sh" manually, the problem is the same.

Can you take a look?

Thanks,

Jianping

[chan-hoo]

@JianpingHuang-NOAA, for retro runs, you should turn off 'DO_REAL_TIME' in config.yaml (DO_REAL_TIME: false). When it is on, some tasks have another dependency as: ` {%- if do_real_time %}

&COMINgfs_BASEDIR;/gfs.@Y@m@d/@H/atmos

{%- endif %} `

[JianpingHuang-NOAA]

I did recheckout the workflow and tested it for Fengsha module and noticed the PM2.5 prediction is changed with varying alpha values now.