[Feature]: separate NLL components by fleet - Githubissues

NOAA-FIMS / FIMS

The repository for development of FIMS

https://noaa-fims.github.io/FIMS/

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[Feature]: separate NLL components by fleet #575

Open ChristineStawitz-NOAA opened 2 weeks ago

ChristineStawitz-NOAA commented 2 weeks ago

Is your feature request related to a problem? Please describe.

@Cole-Monnahan-NOAA flagged this in his GOA pollock case study, right now the NLLs by fleet are not exported, just the sum across fleets

Describe the solution you would like.

Export NLL totals for each fleet directly

Describe alternatives you have considered

Currently, we output the summed NLL

Statistical validity, if applicable

No response

Describe if this is needed for a management application

No response

Additional context

No response

iantaylor-NOAA commented 2 weeks ago

The R output design document includes likelihood associated with each each observation in the fit table: https://docs.google.com/document/d/1n-3D_ywHhmPNITMU6Jjsh7D1ixYc_CcvckKfdPWBGDM/edit?pli=1#heading=h.ghe64oz7zkw These could then be aggregated by fleet or whatever other grouping is needed within helper functions after output.

Therefore any changes to what is returned directly by the FIMS function should focus on likelihoods at the observation level, not by fleet or other higher level grouping.