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NOAA-GFDL / AM4

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Add hdf and mkl libraries to intel.mk #6

Closed underwoo closed 6 years ago

underwoo commented 6 years ago

The intel.mk file didn't have the hdf5 and mkl libraries listed. These are now added.

Also corrected a few inconsistencies in the run script example.

thomas-robinson commented 6 years ago

@underwoo I just looked at the namelist in the AM4 tar file, and it has

        atmos_npes = 432
        atmos_nthreads = 2
        use_hyper_thread = .false.

Either the run script should be updated, or the namelist should be updated.

thomas-robinson commented 6 years ago

@underwoo You might also want to include instructions on how to use the options when running make like compiling with xHost or doing a debug compile. I could do that if you want, or you can include it with this pull request.

thomas-robinson commented 6 years ago

I just logged into tiger and saw that my job ran to completion. It looks like putting -n in quotes made a difference. Or it could be that we reduced the number of arguments in the mpiexec_nopt from the first time we tried it.

underwoo commented 6 years ago

@thomas-robinson I have pushed the two corrections.

The documentation should be done in a separate PR.