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NOAA-GSL / unified-graphics

An experimental visualization system for 3D-RTMA & RRFS model output
https://unified-graphics.noaa.gov/
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Bump the pip-dependencies group with 9 updates #488

Closed dependabot[bot] closed 5 months ago

dependabot[bot] commented 5 months ago

Bumps the pip-dependencies group with 9 updates:

Package From To
flask 3.0.0 3.0.1
xarray 2023.12.0 2024.1.1
scipy 1.11.4 1.12.0
pyarrow 14.0.2 15.0.0
pytest 7.4.4 8.0.0
black 23.12.1 24.1.1
coverage 7.4.0 7.4.1
python-dotenv 1.0.0 1.0.1
moto 4.2.13 5.0.0

Updates flask from 3.0.0 to 3.0.1

Release notes

Sourced from flask's releases.

3.0.1

This is a fix release for the 3.0.x feature release branch.

Fixes an issue where using other JSON providers, such as flask-orjson, previously caused loaded session data to have an incorrect format in some cases.

Changelog

Sourced from flask's changelog.

Version 3.0.1

Released 2024-01-18

  • Correct type for path argument to send_file. :issue:5230
  • Fix a typo in an error message for the flask run --key option. :pr:5344
  • Session data is untagged without relying on the built-in json.loads object_hook. This allows other JSON providers that don't implement that. :issue:5381
  • Address more type findings when using mypy strict mode. :pr:5383
Commits


Updates xarray from 2023.12.0 to 2024.1.1

Release notes

Sourced from xarray's releases.

v2024.01.1

This release is to fix a bug with the rendering of the documentation, but it also includes changes to the handling of pandas frequency strings.

What's Changed

New Contributors

Full Changelog: https://github.com/pydata/xarray/compare/v2024.01.0...v2024.01.1

v2024.01.0

This release brings support for weights in correlation and covariance functions, a new DataArray.cumulative aggregation, improvements to xr.map_blocks, an update to our minimum dependencies, and various bugfixes.

Thanks to our 17 contributors to this release:

Abel Aoun, Deepak Cherian, Illviljan, Johan Mathe, Justus Magin, Kai Mühlbauer, Llorenç Lledó, Mark Harfouche, Markel, Mathias Hauser, Maximilian Roos, Michael Niklas, Niclas Rieger, Sébastien Celles, Tom Nicholas, Trinh Quoc Anh, and crusaderky.

Commits


Updates scipy from 1.11.4 to 1.12.0

Release notes

Sourced from scipy's releases.

SciPy 1.12.0 Release Notes

SciPy 1.12.0 is the culmination of 6 months of hard work. It contains many new features, numerous bug-fixes, improved test coverage and better documentation. There have been a number of deprecations and API changes in this release, which are documented below. All users are encouraged to upgrade to this release, as there are a large number of bug-fixes and optimizations. Before upgrading, we recommend that users check that their own code does not use deprecated SciPy functionality (to do so, run your code with python -Wd and check for DeprecationWarning s). Our development attention will now shift to bug-fix releases on the 1.12.x branch, and on adding new features on the main branch.

This release requires Python 3.9+ and NumPy 1.22.4 or greater.

For running on PyPy, PyPy3 6.0+ is required.

Highlights of this release

  • Experimental support for the array API standard has been added to part of scipy.special, and to all of scipy.fft and scipy.cluster. There are likely to be bugs and early feedback for usage with CuPy arrays, PyTorch tensors, and other array API compatible libraries is appreciated. Use the SCIPY_ARRAY_API environment variable for testing.
  • A new class, ShortTimeFFT, provides a more versatile implementation of the short-time Fourier transform (STFT), its inverse (ISTFT) as well as the (cross-) spectrogram. It utilizes an improved algorithm for calculating the ISTFT.
  • Several new constructors have been added for sparse arrays, and many operations now additionally support sparse arrays, further facilitating the migration from sparse matrices.
  • A large portion of the scipy.stats API now has improved support for handling NaN values, masked arrays, and more fine-grained shape-handling. The accuracy and performance of a number of stats methods have been improved, and a number of new statistical tests and distributions have been added.

New features

scipy.cluster improvements

  • Experimental support added for the array API standard; PyTorch tensors, CuPy arrays and array API compatible array libraries are now accepted (GPU support is limited to functions with pure Python implementations). CPU arrays which can be converted to and from NumPy are supported module-wide and returned arrays will match the input type. This behaviour is enabled by setting the SCIPY_ARRAY_API environment variable before importing scipy. This experimental support is still under development and likely to contain bugs - testing is very welcome.

... (truncated)

Commits
  • 4edfcaa REL: SciPy 1.12.0 release commit [wheel build]
  • e3cff26 Merge pull request #19922 from tylerjereddy/treddy_1_12_0_final_prep
  • bf02582 DOC: PR 19922 revisions [wheel build]
  • 41ed3d6 Revert "ENH: stats.wasserstein_distance: multivariate Wasserstein distance/EM...
  • db2cb8c DOC: update 1.12.0 relnotes
  • c76bedf BLD: ensure the name of the installed scipy package is lower-case
  • aedbb2b DEP: reflect extended deprecations also in release notes (#19903)
  • 0b4c8dc DEP: extend some announced deprecations due to out-of-band 1.13 release (#19892)
  • 82dddc5 DOC: 1.12 release notes tweaks (#19877)
  • e22a5ff REL: 1.12.0 final unreleased
  • Additional commits viewable in compare view


Updates pyarrow from 14.0.2 to 15.0.0

Commits


Updates pytest from 7.4.4 to 8.0.0

Release notes

Sourced from pytest's releases.

pytest 8.0.0 (2024-01-27)

See 8.0.0rc1 and 8.0.0rc2 for the full changes since pytest 7.4!

Bug Fixes

  • #11842: Properly escape the reason of a skip <pytest.mark.skip ref>{.interpreted-text role="ref"} mark when writing JUnit XML files.
  • #11861: Avoid microsecond exceeds 1_000_000 when using log-date-format with %f specifier, which might cause the test suite to crash.

8.0.0rc2

pytest 8.0.0rc2 (2024-01-17)

Improvements

  • #11233: Improvements to -r for xfailures and xpasses:
    • Report tracebacks for xfailures when -rx is set.
    • Report captured output for xpasses when -rX is set.
    • For xpasses, add - in summary between test name and reason, to match how xfail is displayed.
  • #11825: The pytest_plugin_registered{.interpreted-text role="hook"} hook has a new plugin_name parameter containing the name by which plugin is registered.

Bug Fixes

  • #11706: Fix reporting of teardown errors in higher-scoped fixtures when using [--maxfail]{.title-ref} or [--stepwise]{.title-ref}.

  • #11758: Fixed IndexError: string index out of range crash in if highlighted[-1] == "\n" and source[-1] != "\n". This bug was introduced in pytest 8.0.0rc1.

  • #9765, #11816: Fixed a frustrating bug that afflicted some users with the only error being assert mod not in mods. The issue was caused by the fact that str(Path(mod)) and mod.__file__ don't necessarily produce the same string, and was being erroneously used interchangably in some places in the code.

    This fix also broke the internal API of PytestPluginManager.consider_conftest by introducing a new parameter -- we mention this in case it is being used by external code, even if marked as private.

pytest 8.0.0rc1 (2023-12-30)

See https://docs.pytest.org/en/latest/changelog.html#pytest-8-0-0rc1-2023-12-30 for the rendered changelog.

Breaking Changes

Old Deprecations Are Now Errors

  • #7363: PytestRemovedIn8Warning deprecation warnings are now errors by default.

    Following our plan to remove deprecated features with as little disruption as possible, all warnings of type PytestRemovedIn8Warning now generate errors instead of warning messages by default.

    The affected features will be effectively removed in pytest 8.1, so please consult the deprecations{.interpreted-text role="ref"} section in the docs for directions on how to update existing code.

    In the pytest 8.0.X series, it is possible to change the errors back into warnings as a stopgap measure by adding this to your pytest.ini file:

    [pytest]

... (truncated)

Commits
  • 478f823 Prepare release version 8.0.0
  • 6085900 [8.0.x] fix: avoid rounding microsecond to 1_000_000 (#11863)
  • 3b41c65 [8.0.x] Escape skip reason in junitxml (#11845)
  • 747072a [8.0.x] Update docstring of scripts/generate-gh-release-notes.py (#11768)
  • 011a475 Properly attach packages to the GH release notes (#11839) (#11840)
  • 97960bd Merge pull request #11835 from pytest-dev/release-8.0.0rc2
  • 6be0a3c Prepare release version 8.0.0rc2
  • 44ffe07 Merge pull request #11837 from pytest-dev/backport-11836-to-8.0.x
  • 14ecb04 [8.0.x] testing: temporarily disable test due to hypothesis issue
  • 41c8dab Merge pull request #11831 from bluetech/backport-11825-to-8.0.x
  • Additional commits viewable in compare view


Updates black from 23.12.1 to 24.1.1

Release notes

Sourced from black's releases.

24.1.1

Bugfix release to fix a bug that made Black unusable on certain file systems with strict limits on path length.

Preview style

  • Consistently add trailing comma on typed parameters (#4164)

Configuration

  • Shorten the length of the name of the cache file to fix crashes on file systems that do not support long paths (#4176)

24.1.0

Highlights

This release introduces the new 2024 stable style (#4106), stabilizing the following changes:

  • Add parentheses around if-else expressions (#2278)
  • Dummy class and function implementations consisting only of ... are formatted more compactly (#3796)
  • If an assignment statement is too long, we now prefer splitting on the right-hand side (#3368)
  • Hex codes in Unicode escape sequences are now standardized to lowercase (#2916)
  • Allow empty first lines at the beginning of most blocks (#3967, #4061)
  • Add parentheses around long type annotations (#3899)
  • Enforce newline after module docstrings (#3932, #4028)
  • Fix incorrect magic trailing comma handling in return types (#3916)
  • Remove blank lines before class docstrings (#3692)
  • Wrap multiple context managers in parentheses if combined in a single with statement (#3489)
  • Fix bug in line length calculations for power operations (#3942)
  • Add trailing commas to collection literals even if there's a comment after the last entry (#3393)
  • When using --skip-magic-trailing-comma or -C, trailing commas are stripped from subscript expressions with more than 1 element (#3209)
  • Add extra blank lines in stubs in a few cases (#3564, #3862)
  • Accept raw strings as docstrings (#3947)
  • Split long lines in case blocks (#4024)
  • Stop removing spaces from walrus operators within subscripts (#3823)
  • Fix incorrect formatting of certain async statements (#3609)
  • Allow combining # fmt: skip with other comments (#3959)

There are already a few improvements in the --preview style, which are slated for the 2025 stable style. Try them out and share your feedback. In the past, the preview style has included some features that we were not able to stabilize. This year, we're

... (truncated)

Changelog

Sourced from black's changelog.

24.1.1

Bugfix release to fix a bug that made Black unusable on certain file systems with strict limits on path length.

Preview style

  • Consistently add trailing comma on typed parameters (#4164)

Configuration

  • Shorten the length of the name of the cache file to fix crashes on file systems that do not support long paths (#4176)

24.1.0

Highlights

This release introduces the new 2024 stable style (#4106), stabilizing the following changes:

  • Add parentheses around if-else expressions (#2278)
  • Dummy class and function implementations consisting only of ... are formatted more compactly (#3796)
  • If an assignment statement is too long, we now prefer splitting on the right-hand side (#3368)
  • Hex codes in Unicode escape sequences are now standardized to lowercase (#2916)
  • Allow empty first lines at the beginning of most blocks (#3967, #4061)
  • Add parentheses around long type annotations (#3899)
  • Enforce newline after module docstrings (#3932, #4028)
  • Fix incorrect magic trailing comma handling in return types (#3916)
  • Remove blank lines before class docstrings (#3692)
  • Wrap multiple context managers in parentheses if combined in a single with statement (#3489)
  • Fix bug in line length calculations for power operations (#3942)
  • Add trailing commas to collection literals even if there's a comment after the last entry (#3393)
  • When using --skip-magic-trailing-comma or -C, trailing commas are stripped from subscript expressions with more than 1 element (#3209)
  • Add extra blank lines in stubs in a few cases (#3564, #3862)
  • Accept raw strings as docstrings (#3947)
  • Split long lines in case blocks (#4024)
  • Stop removing spaces from walrus operators within subscripts (#3823)
  • Fix incorrect formatting of certain async statements (#3609)
  • Allow combining # fmt: skip with other comments (#3959)

There are already a few improvements in the --preview style, which are slated for the 2025 stable style. Try them out and share your feedback. In the past, the preview style has included some features that we were not able to stabilize. This year, we're

... (truncated)

Commits


Updates coverage from 7.4.0 to 7.4.1

Changelog

Sourced from coverage's changelog.

Version 7.4.1 — 2024-01-26

  • Python 3.13.0a3 is supported.

  • Fix: the JSON report now includes an explicit format version number, closing issue 1732_.

.. _issue 1732: nedbat/coveragepy#1732

.. _changes_7-4-0:

Commits
  • 07588ea test: give hypothesis a little more time
  • 2c96518 build: tags should be signed
  • 8d1857f docs: sample HTML for 7.4.1
  • ddc88f7 docs: prep for 7.4.1
  • 98cd671 docs: correct two library urls
  • 498b8c9 build: coverage runs have to skip windows pypy too
  • 75b22f0 test: ignore color in tracebacks
  • b7c41a2 build: show action environment variables for debugging
  • f8be865 build: run actions on 3.13 since a3 came out.
  • de60a6d build(deps): bump actions/dependency-review-action from 3 to 4
  • Additional commits viewable in compare view


Updates python-dotenv from 1.0.0 to 1.0.1

Release notes

Sourced from python-dotenv's releases.

v1.0.1

What's Changed

New Contributors

Full Changelog: https://github.com/theskumar/python-dotenv/compare/v1.0.0...v1.0.1

Changelog

Sourced from python-dotenv's changelog.

[1.0.1] - 2024-01-23

Fixed

  • Gracefully handle code which has been imported from a zipfile (#456 by [@​samwyma])
  • Allow modules using load_dotenv to be reloaded when launched in a separate thread (#497 by [@​freddyaboulton])
  • Fix file not closed after deletion, handle error in the rewrite function (#469 by [@​Qwerty-133])

Misc

Commits
  • d6c0b96 Bumpversion 1.0.0 -> 1.0.1
  • 42dc086 Update changelog for 1.0.1
  • b1eebba Add python 3.12 and pypy3.10 to test runner
  • 6ff1391 Fix temporary file is deleted before closing, in the rewrite function (#468)
  • 0b94ac0 Allow modules using load_dotenv to be reloaded when launched in a separate th...
  • 3ffcef6 Use https in README links (#474)
  • be96be2 Use pathlib.Path in tests (#466)
  • 137bc3d Gracefully handle code which has been imported from a zipfile (#456)
  • dd1af68 FIx year in release in changelog (#453)
  • See full diff in compare view


Updates moto from 4.2.13 to 5.0.0

Changelog

Sourced from moto's changelog.

5.0.0

Docker Digest for 5.0.0: sha256:2faf2460a6446dfe472ac0d799e00341b1c84203d08540c247a6cc09be7c54e9

General:
    * All decorators have been replaced with a single decorator:
      `mock_aws`

* The `mock_batch_simple` and `mock_lambda_simple` decorators can now be configured using the `config`-parameter:
  `@mock_aws(config={&quot;batch&quot;: {&quot;use_docker&quot;: False}, &quot;lambda&quot;: {&quot;use_docker&quot;: False}})`

* It is now possible to configure methods/services which should reach out to AWS.
  @mock_aws(
      config={&quot;core&quot;: {&quot;mock_credentials&quot;: False, &quot;passthrough&quot;: {&quot;urls&quot;: [], &quot;services&quot;: []}}}
  )

* All requests now return a RequestId



Miscellaneous:


* IAM: The AWS managed Policies are no longer loaded by default.
  If your application depends on these policies, tell Moto explicitly to load them like so:

  @mock_aws(config={&quot;iam&quot;: {&quot;load_aws_managed_policies&quot;: True}})

  Or by setting an environment variable:
  MOTO_IAM_LOAD_MANAGED_POLICIES=true

* S3: list_objects() now returns a hashed ContinuationToken

4.2.14

Docker Digest for 4.2.14: sha256:2fa10aa48e32f85c63c62a7d437b8a4b320a56a8494bc25d45ced370bc159c23

New Services:
    * Backup:
        * create_backup_plan()
        * create_backup_vault()
        * get_backup_plan()
        * describe_backup_vault()
        * delete_backup_plan()
        * list_backup_plans()
        * list_backup_vaults()
        * list_tags()
        * tag_resource()
        * untag_resource()

New Methods:
* RDS:

... (truncated)

Commits
  • 0255717 Prep Release V5
  • 38f6359 Refactoring: Adding typing for event message structure (#7234)
  • 38ee3fa Prep release 5.0.0alpha3
  • 09c5751 MotoServer: skip using HTTP_HOST header when determining request origin (#7225)
  • 8199a88 Techdebt: Update scaffolding to use mock_aws (#7221)
  • dea4a98 Techdebt: Remove old/deprecated code (#7220)
  • 16ba3de Techdebt: Verify minimum boto3-version, up minimum responses version (#7218)
  • f834d98 IAM: Only load AWS Managed Policies on request (#7219)
  • 0c8ccbb Techdebt: Hide private decorator-methods/attributes (#7216)
  • 5aa3cc9 S3: list_objects_v2() should have a hashed NextContinuationToken (#7187)
  • Additional commits viewable in compare view


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dependabot[bot] commented 5 months ago

Looks like these dependencies are updatable in another way, so this is no longer needed.