search

NOAA-OWP / ngen

Next Generation Water Modeling Engine and Framework Prototype
Other
84 stars 63 forks source link

NGEN fails to build using tutorial instructions #512

Closed jarq6c closed 1 year ago

jarq6c commented 1 year ago

I followed the tutorial linked below and was unable to build and run NGEN.

https://github.com/NOAA-OWP/ngen/wiki/NGen-Tutorial

Linux 3.10.0-1160.88.1.el7.x86_64 #1 SMP Sat Feb 18 13:27:00 UTC 2023 x86_64 x86_64 x86_64 GNU/Linux gcc (GCC) 4.8.5 20150623 (Red Hat 4.8.5-44) GNU Fortran (GCC) 4.8.5 20150623 (Red Hat 4.8.5-44)

Final error:

CMake Error at /usr/share/cmake3/Modules/FindPackageHandleStandardArgs.cmake:164 (message):
  Could NOT find Boost: Found unsuitable version "1.53.0", but required is at
  least "1.72.0" (found /usr/include)
Call Stack (most recent call first):
  /usr/share/cmake3/Modules/FindPackageHandleStandardArgs.cmake:443 (_FPHSA_FAILURE_MESSAGE)
  /usr/share/cmake3/Modules/FindBoost.cmake:2166 (find_package_handle_standard_args)
  CMakeLists.txt:114 (find_package)

-- Configuring incomplete, errors occurred!
See also "ngen/cmake_build/CMakeFiles/CMakeOutput.log".

Specifically, I used these commands, listed under "TL;DR":

alias cmake=cmake3
git clone https://github.com/noaa-owp/ngen &&
cd ngen &&
git submodule update --init &&
cmake -B extern/cfe/cmake_build -S extern/cfe && 
make -C extern/cfe/cmake_build && 
cmake -B extern/topmodel/cmake_build -S extern/topmodel && 
make -C extern/topmodel/cmake_build && 
cmake -B extern/noah-owp-modular/cmake_build -S extern/noah-owp-modular && 
make -C extern/noah-owp-modular/cmake_build &&
cmake -B extern/iso_c_fortran_bmi/cmake_build -S extern/iso_c_fortran_bmi &&
make -C extern/iso_c_fortran_bmi/cmake_build &&
cmake -B cmake_build -S . -DNGEN_ACTIVATE_PYTHON:BOOL=ON -DBMI_C_LIB_ACTIVE:BOOL=ON -DBMI_FORTRAN_ACTIVE:BOOL=ON &&
make -j 8 -C cmake_build &&
cmake -B extern/test_bmi_c/cmake_build -S extern/test_bmi_c && 
make -C extern/test_bmi_c/cmake_build && 
cmake -B extern/test_bmi_fortran/cmake_build -S extern/test_bmi_fortran && 
make -C extern/test_bmi_fortran/cmake_build &&
./cmake_build/test/test_unit && 
./cmake_build/test/test_bmi_c && 
./cmake_build/test/test_bmi_fortran

Current behavior

  1. I receive several warnings, partially copied below:

    make: Warning: File `Makefile' has modification time 0.24 s in the future
...
make[2]: warning:  Clock skew detected.  Your build may be incomplete.
    ngen/extern/iso_c_fortran_bmi/src/iso_c_bmi.f90:597.57:

function set_value_at_indices_double(this, name, inds, src) result(bmi_stat
                                                     1
Warning: Unused dummy argument 'inds' at (1)
    ngen/extern/iso_c_fortran_bmi/src/iso_c_bmi.f90: In function ‘set_value_double’:
ngen/extern/iso_c_fortran_bmi/src/iso_c_bmi.f90:567:0: warning: ‘.f_str’ may be used uninitialized in this function [-Wmaybe-uninitialized]
   f_str = c_to_f_string(name)
^
    ngen/extern/noah-owp-modular/noah-owp-modular/src/DateTimeUtilsModule.f90:957.18:

julian_date = int (365.25*y-yr_corr) + int (30.6001*(m+1)) + d + 1720994.0
              1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)

Here's the cmake logs:

 cat cmake_build/CMakeFiles/CMakeOutput.log
The system is: Linux - 3.10.0-1160.88.1.el7.x86_64 - x86_64
Compiling the C compiler identification source file "CMakeCCompilerId.c" succeeded.
Compiler: /usr/bin/cc
Build flags:
Id flags:

The output was:
0

Compilation of the C compiler identification source "CMakeCCompilerId.c" produced "a.out"

The C compiler identification is GNU, found in "ngen/cmake_build/CMakeFiles/3.17.5/CompilerIdC/a.out"

Compiling the CXX compiler identification source file "CMakeCXXCompilerId.cpp" succeeded.
Compiler: /usr/bin/c++
Build flags:
Id flags:

The output was:
0

Compilation of the CXX compiler identification source "CMakeCXXCompilerId.cpp" produced "a.out"

The CXX compiler identification is GNU, found in "ngen/cmake_build/CMakeFiles/3.17.5/CompilerIdCXX/a.out"

Determining if the C compiler works passed with the following output:
Change Dir: ngen/cmake_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake cmTC_8f6f9/fast && gmake: Warning: File `Makefile' has modification time 0.3 s in the future
/usr/bin/gmake  -f CMakeFiles/cmTC_8f6f9.dir/build.make CMakeFiles/cmTC_8f6f9.dir/build
gmake[1]: Entering directory `ngen/cmake_build/CMakeFiles/CMakeTmp'
gmake[1]: Warning: File `CMakeFiles/cmTC_8f6f9.dir/flags.make' has modification time 0.3 s in the future
Building C object CMakeFiles/cmTC_8f6f9.dir/testCCompiler.c.o
/usr/bin/cc    -o CMakeFiles/cmTC_8f6f9.dir/testCCompiler.c.o   -c ngen/cmake_build/CMakeFiles/CMakeTmp/testCCompiler.c
Linking C executable cmTC_8f6f9
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/cmTC_8f6f9.dir/link.txt --verbose=1
/usr/bin/cc      CMakeFiles/cmTC_8f6f9.dir/testCCompiler.c.o  -o cmTC_8f6f9
gmake[1]: warning:  Clock skew detected.  Your build may be incomplete.
gmake[1]: Leaving directory `ngen/cmake_build/CMakeFiles/CMakeTmp'
gmake: warning:  Clock skew detected.  Your build may be incomplete.

Detecting C compiler ABI info compiled with the following output:
Change Dir: ngen/cmake_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake cmTC_0a06f/fast && gmake: Warning: File `Makefile' has modification time 0.3 s in the future
/usr/bin/gmake  -f CMakeFiles/cmTC_0a06f.dir/build.make CMakeFiles/cmTC_0a06f.dir/build
gmake[1]: Entering directory `ngen/cmake_build/CMakeFiles/CMakeTmp'
gmake[1]: Warning: File `CMakeFiles/cmTC_0a06f.dir/flags.make' has modification time 0.29 s in the future
Building C object CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o
/usr/bin/cc   -v -o CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o   -c /usr/share/cmake3/Modules/CMakeCCompilerABI.c
Using built-in specs.
COLLECT_GCC=/usr/bin/cc
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux
Thread model: posix
gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC)
COLLECT_GCC_OPTIONS='-v' '-o' 'CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o' '-c' '-mtune=generic' '-march=x86-64'
 /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/cc1 -quiet -v /usr/share/cmake3/Modules/CMakeCCompilerABI.c -quiet -dumpbase CMakeCCompilerABI.c -mtune=generic -march=x86-64 -auxbase-strip CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o -version -o /tmp/ccM1wcgx.s
GNU C (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux)
        compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include-fixed"
ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../x86_64-redhat-linux/include"
#include "..." search starts here:
#include <...> search starts here:
 /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include
 /usr/local/include
 /usr/include
End of search list.
GNU C (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux)
        compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
Compiler executable checksum: f578243089434e25c47d91ee1154d9e2
COLLECT_GCC_OPTIONS='-v' '-o' 'CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o' '-c' '-mtune=generic' '-march=x86-64'
 as -v --64 -o CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o /tmp/ccM1wcgx.s
GNU assembler version 2.27 (x86_64-redhat-linux) using BFD version version 2.27-44.base.el7_9.1
COMPILER_PATH=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/
LIBRARY_PATH=/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../:/lib/:/usr/lib/
COLLECT_GCC_OPTIONS='-v' '-o' 'CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o' '-c' '-mtune=generic' '-march=x86-64'
Linking C executable cmTC_0a06f
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/cmTC_0a06f.dir/link.txt --verbose=1
/usr/bin/cc     -v CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o  -o cmTC_0a06f
Using built-in specs.
COLLECT_GCC=/usr/bin/cc
COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux
Thread model: posix
gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC)
COMPILER_PATH=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/
LIBRARY_PATH=/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../:/lib/:/usr/lib/
COLLECT_GCC_OPTIONS='-v' '-o' 'cmTC_0a06f' '-mtune=generic' '-march=x86-64'
 /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/collect2 --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o cmTC_0a06f /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o -lgcc --as-needed -lgcc_s --no-as-needed -lc -lgcc --as-needed -lgcc_s --no-as-needed /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o
gmake[1]: warning:  Clock skew detected.  Your build may be incomplete.
gmake[1]: Leaving directory `ngen/cmake_build/CMakeFiles/CMakeTmp'
gmake: warning:  Clock skew detected.  Your build may be incomplete.

Parsed C implicit include dir info from above output: rv=done
  found start of include info
  found start of implicit include info
    add: [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include]
    add: [/usr/local/include]
    add: [/usr/include]
  end of search list found
  collapse include dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include] ==> [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include]
  collapse include dir [/usr/local/include] ==> [/usr/local/include]
  collapse include dir [/usr/include] ==> [/usr/include]
  implicit include dirs: [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include;/usr/local/include;/usr/include]

Parsed C implicit link information from above output:
  link line regex: [^( *|.*[/\])(ld|CMAKE_LINK_STARTFILE-NOTFOUND|([^/\]+-)?ld|collect2)[^/\]*( |$)]
  ignore line: [Change Dir: ngen/cmake_build/CMakeFiles/CMakeTmp]
  ignore line: []
  ignore line: [Run Build Command(s):/usr/bin/gmake cmTC_0a06f/fast && gmake: Warning: File `Makefile' has modification time 0.3 s in the future]
  ignore line: [/usr/bin/gmake  -f CMakeFiles/cmTC_0a06f.dir/build.make CMakeFiles/cmTC_0a06f.dir/build]
  ignore line: [gmake[1]: Entering directory `ngen/cmake_build/CMakeFiles/CMakeTmp']
  ignore line: [gmake[1]: Warning: File `CMakeFiles/cmTC_0a06f.dir/flags.make' has modification time 0.29 s in the future]
  ignore line: [Building C object CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o]
  ignore line: [/usr/bin/cc   -v -o CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o   -c /usr/share/cmake3/Modules/CMakeCCompilerABI.c]
  ignore line: [Using built-in specs.]
  ignore line: [COLLECT_GCC=/usr/bin/cc]
  ignore line: [Target: x86_64-redhat-linux]
  ignore line: [Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c c++ objc obj-c++ java fortran ada go lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux]
  ignore line: [Thread model: posix]
  ignore line: [gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC) ]
  ignore line: [COLLECT_GCC_OPTIONS='-v' '-o' 'CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o' '-c' '-mtune=generic' '-march=x86-64']
  ignore line: [ /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/cc1 -quiet -v /usr/share/cmake3/Modules/CMakeCCompilerABI.c -quiet -dumpbase CMakeCCompilerABI.c -mtune=generic -march=x86-64 -auxbase-strip CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o -version -o /tmp/ccM1wcgx.s]
  ignore line: [GNU C (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux)]
  ignore line: [        compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44)  GMP version 6.0.0  MPFR version 3.1.1  MPC version 1.0.1]
  ignore line: [GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072]
  ignore line: [ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include-fixed"]
  ignore line: [ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../x86_64-redhat-linux/include"]
  ignore line: [#include "..." search starts here:]
  ignore line: [#include <...> search starts here:]
  ignore line: [ /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include]
  ignore line: [ /usr/local/include]
  ignore line: [ /usr/include]
  ignore line: [End of search list.]
  ignore line: [GNU C (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux)]
  ignore line: [        compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44)  GMP version 6.0.0  MPFR version 3.1.1  MPC version 1.0.1]
  ignore line: [GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072]
  ignore line: [Compiler executable checksum: f578243089434e25c47d91ee1154d9e2]
  ignore line: [COLLECT_GCC_OPTIONS='-v' '-o' 'CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o' '-c' '-mtune=generic' '-march=x86-64']
  ignore line: [ as -v --64 -o CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o /tmp/ccM1wcgx.s]
  ignore line: [GNU assembler version 2.27 (x86_64-redhat-linux) using BFD version version 2.27-44.base.el7_9.1]
  ignore line: [COMPILER_PATH=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/]
  ignore line: [LIBRARY_PATH=/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../:/lib/:/usr/lib/]
  ignore line: [COLLECT_GCC_OPTIONS='-v' '-o' 'CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o' '-c' '-mtune=generic' '-march=x86-64']
  ignore line: [Linking C executable cmTC_0a06f]
  ignore line: [/usr/bin/cmake3 -E cmake_link_script CMakeFiles/cmTC_0a06f.dir/link.txt --verbose=1]
  ignore line: [/usr/bin/cc     -v CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o  -o cmTC_0a06f ]
  ignore line: [Using built-in specs.]
  ignore line: [COLLECT_GCC=/usr/bin/cc]
  ignore line: [COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper]
  ignore line: [Target: x86_64-redhat-linux]
  ignore line: [Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c c++ objc obj-c++ java fortran ada go lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux]
  ignore line: [Thread model: posix]
  ignore line: [gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC) ]
  ignore line: [COMPILER_PATH=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/]
  ignore line: [LIBRARY_PATH=/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../:/lib/:/usr/lib/]
  ignore line: [COLLECT_GCC_OPTIONS='-v' '-o' 'cmTC_0a06f' '-mtune=generic' '-march=x86-64']
  link line: [ /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/collect2 --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o cmTC_0a06f /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o -lgcc --as-needed -lgcc_s --no-as-needed -lc -lgcc --as-needed -lgcc_s --no-as-needed /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o]
    arg [/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/collect2] ==> ignore
    arg [--build-id] ==> ignore
    arg [--no-add-needed] ==> ignore
    arg [--eh-frame-hdr] ==> ignore
    arg [--hash-style=gnu] ==> ignore
    arg [-m] ==> ignore
    arg [elf_x86_64] ==> ignore
    arg [-dynamic-linker] ==> ignore
    arg [/lib64/ld-linux-x86-64.so.2] ==> ignore
    arg [-o] ==> ignore
    arg [cmTC_0a06f] ==> ignore
    arg [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o] ==> ignore
    arg [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o] ==> ignore
    arg [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o] ==> ignore
    arg [-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5] ==> dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5]
    arg [-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64] ==> dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64]
    arg [-L/lib/../lib64] ==> dir [/lib/../lib64]
    arg [-L/usr/lib/../lib64] ==> dir [/usr/lib/../lib64]
    arg [-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../..] ==> dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../..]
    arg [CMakeFiles/cmTC_0a06f.dir/CMakeCCompilerABI.c.o] ==> ignore
    arg [-lgcc] ==> lib [gcc]
    arg [--as-needed] ==> ignore
    arg [-lgcc_s] ==> lib [gcc_s]
    arg [--no-as-needed] ==> ignore
    arg [-lc] ==> lib [c]
    arg [-lgcc] ==> lib [gcc]
    arg [--as-needed] ==> ignore
    arg [-lgcc_s] ==> lib [gcc_s]
    arg [--no-as-needed] ==> ignore
    arg [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o] ==> ignore
    arg [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o] ==> ignore
  collapse library dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5] ==> [/usr/lib/gcc/x86_64-redhat-linux/4.8.5]
  collapse library dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64] ==> [/usr/lib64]
  collapse library dir [/lib/../lib64] ==> [/lib64]
  collapse library dir [/usr/lib/../lib64] ==> [/usr/lib64]
  collapse library dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../..] ==> [/usr/lib]
  implicit libs: [gcc;gcc_s;c;gcc;gcc_s]
  implicit dirs: [/usr/lib/gcc/x86_64-redhat-linux/4.8.5;/usr/lib64;/lib64;/usr/lib]
  implicit fwks: []

Determining if the CXX compiler works passed with the following output:
Change Dir: ngen/cmake_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake cmTC_38685/fast && gmake: Warning: File `Makefile' has modification time 0.31 s in the future
/usr/bin/gmake  -f CMakeFiles/cmTC_38685.dir/build.make CMakeFiles/cmTC_38685.dir/build
gmake[1]: Entering directory `ngen/cmake_build/CMakeFiles/CMakeTmp'
gmake[1]: Warning: File `CMakeFiles/cmTC_38685.dir/flags.make' has modification time 0.31 s in the future
Building CXX object CMakeFiles/cmTC_38685.dir/testCXXCompiler.cxx.o
/usr/bin/c++     -o CMakeFiles/cmTC_38685.dir/testCXXCompiler.cxx.o -c ngen/cmake_build/CMakeFiles/CMakeTmp/testCXXCompiler.cxx
Linking CXX executable cmTC_38685
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/cmTC_38685.dir/link.txt --verbose=1
/usr/bin/c++       CMakeFiles/cmTC_38685.dir/testCXXCompiler.cxx.o  -o cmTC_38685
gmake[1]: warning:  Clock skew detected.  Your build may be incomplete.
gmake[1]: Leaving directory `ngen/cmake_build/CMakeFiles/CMakeTmp'
gmake: warning:  Clock skew detected.  Your build may be incomplete.

Detecting CXX compiler ABI info compiled with the following output:
Change Dir: ngen/cmake_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake cmTC_fcd8d/fast && gmake: Warning: File `Makefile' has modification time 0.32 s in the future
/usr/bin/gmake  -f CMakeFiles/cmTC_fcd8d.dir/build.make CMakeFiles/cmTC_fcd8d.dir/build
gmake[1]: Entering directory `ngen/cmake_build/CMakeFiles/CMakeTmp'
gmake[1]: Warning: File `CMakeFiles/cmTC_fcd8d.dir/flags.make' has modification time 0.31 s in the future
Building CXX object CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o
/usr/bin/c++    -v -o CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o -c /usr/share/cmake3/Modules/CMakeCXXCompilerABI.cpp
Using built-in specs.
COLLECT_GCC=/usr/bin/c++
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux
Thread model: posix
gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC)
COLLECT_GCC_OPTIONS='-v' '-o' 'CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o' '-c' '-shared-libgcc' '-mtune=generic' '-march=x86-64'
 /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/cc1plus -quiet -v -D_GNU_SOURCE /usr/share/cmake3/Modules/CMakeCXXCompilerABI.cpp -quiet -dumpbase CMakeCXXCompilerABI.cpp -mtune=generic -march=x86-64 -auxbase-strip CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o -version -o /tmp/cc6sJ5RT.s
GNU C++ (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux)
        compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include-fixed"
ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../x86_64-redhat-linux/include"
#include "..." search starts here:
#include <...> search starts here:
 /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../include/c++/4.8.5
 /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../include/c++/4.8.5/x86_64-redhat-linux
 /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../include/c++/4.8.5/backward
 /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include
 /usr/local/include
 /usr/include
End of search list.
GNU C++ (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux)
        compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
Compiler executable checksum: 870b38fd8ce6d67c02dcc3b6efdbe63d
COLLECT_GCC_OPTIONS='-v' '-o' 'CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o' '-c' '-shared-libgcc' '-mtune=generic' '-march=x86-64'
 as -v --64 -o CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o /tmp/cc6sJ5RT.s
GNU assembler version 2.27 (x86_64-redhat-linux) using BFD version version 2.27-44.base.el7_9.1
COMPILER_PATH=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/
LIBRARY_PATH=/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../:/lib/:/usr/lib/
COLLECT_GCC_OPTIONS='-v' '-o' 'CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o' '-c' '-shared-libgcc' '-mtune=generic' '-march=x86-64'
Linking CXX executable cmTC_fcd8d
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/cmTC_fcd8d.dir/link.txt --verbose=1
/usr/bin/c++      -v CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o  -o cmTC_fcd8d
Using built-in specs.
COLLECT_GCC=/usr/bin/c++
COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux
Thread model: posix
gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC)
COMPILER_PATH=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/
LIBRARY_PATH=/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../:/lib/:/usr/lib/
COLLECT_GCC_OPTIONS='-v' '-o' 'cmTC_fcd8d' '-shared-libgcc' '-mtune=generic' '-march=x86-64'
 /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/collect2 --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o cmTC_fcd8d /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o
gmake[1]: warning:  Clock skew detected.  Your build may be incomplete.
gmake[1]: Leaving directory `ngen/cmake_build/CMakeFiles/CMakeTmp'
gmake: warning:  Clock skew detected.  Your build may be incomplete.

Parsed CXX implicit include dir info from above output: rv=done
  found start of include info
  found start of implicit include info
    add: [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../include/c++/4.8.5]
    add: [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../include/c++/4.8.5/x86_64-redhat-linux]
    add: [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../include/c++/4.8.5/backward]
    add: [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include]
    add: [/usr/local/include]
    add: [/usr/include]
  end of search list found
  collapse include dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../include/c++/4.8.5] ==> [/usr/include/c++/4.8.5]
  collapse include dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../include/c++/4.8.5/x86_64-redhat-linux] ==> [/usr/include/c++/4.8.5/x86_64-redhat-linux]
  collapse include dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../include/c++/4.8.5/backward] ==> [/usr/include/c++/4.8.5/backward]
  collapse include dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include] ==> [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include]
  collapse include dir [/usr/local/include] ==> [/usr/local/include]
  collapse include dir [/usr/include] ==> [/usr/include]
  implicit include dirs: [/usr/include/c++/4.8.5;/usr/include/c++/4.8.5/x86_64-redhat-linux;/usr/include/c++/4.8.5/backward;/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include;/usr/local/include;/usr/include]

Parsed CXX implicit link information from above output:
  link line regex: [^( *|.*[/\])(ld|CMAKE_LINK_STARTFILE-NOTFOUND|([^/\]+-)?ld|collect2)[^/\]*( |$)]
  ignore line: [Change Dir: ngen/cmake_build/CMakeFiles/CMakeTmp]
  ignore line: []
  ignore line: [Run Build Command(s):/usr/bin/gmake cmTC_fcd8d/fast && gmake: Warning: File `Makefile' has modification time 0.32 s in the future]
  ignore line: [/usr/bin/gmake  -f CMakeFiles/cmTC_fcd8d.dir/build.make CMakeFiles/cmTC_fcd8d.dir/build]
  ignore line: [gmake[1]: Entering directory `ngen/cmake_build/CMakeFiles/CMakeTmp']
  ignore line: [gmake[1]: Warning: File `CMakeFiles/cmTC_fcd8d.dir/flags.make' has modification time 0.31 s in the future]
  ignore line: [Building CXX object CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o]
  ignore line: [/usr/bin/c++    -v -o CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o -c /usr/share/cmake3/Modules/CMakeCXXCompilerABI.cpp]
  ignore line: [Using built-in specs.]
  ignore line: [COLLECT_GCC=/usr/bin/c++]
  ignore line: [Target: x86_64-redhat-linux]
  ignore line: [Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c c++ objc obj-c++ java fortran ada go lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux]
  ignore line: [Thread model: posix]
  ignore line: [gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC) ]
  ignore line: [COLLECT_GCC_OPTIONS='-v' '-o' 'CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o' '-c' '-shared-libgcc' '-mtune=generic' '-march=x86-64']
  ignore line: [ /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/cc1plus -quiet -v -D_GNU_SOURCE /usr/share/cmake3/Modules/CMakeCXXCompilerABI.cpp -quiet -dumpbase CMakeCXXCompilerABI.cpp -mtune=generic -march=x86-64 -auxbase-strip CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o -version -o /tmp/cc6sJ5RT.s]
  ignore line: [GNU C++ (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux)]
  ignore line: [        compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44)  GMP version 6.0.0  MPFR version 3.1.1  MPC version 1.0.1]
  ignore line: [GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072]
  ignore line: [ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/include-fixed"]
  ignore line: [ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../x86_64-redhat-linux/include"]
  ignore line: [#include "..." search starts here:]
  ignore line: [#include <...> search starts here:]
  ignore line: [ /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../include/c++/4.8.5]
  ignore line: [ /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../include/c++/4.8.5/x86_64-redhat-linux]
  ignore line: [ /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../include/c++/4.8.5/backward]
  ignore line: [ /usr/lib/gcc/x86_64-redhat-linux/4.8.5/include]
  ignore line: [ /usr/local/include]
  ignore line: [ /usr/include]
  ignore line: [End of search list.]
  ignore line: [GNU C++ (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-44) (x86_64-redhat-linux)]
  ignore line: [        compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-44)  GMP version 6.0.0  MPFR version 3.1.1  MPC version 1.0.1]
  ignore line: [GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072]
  ignore line: [Compiler executable checksum: 870b38fd8ce6d67c02dcc3b6efdbe63d]
  ignore line: [COLLECT_GCC_OPTIONS='-v' '-o' 'CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o' '-c' '-shared-libgcc' '-mtune=generic' '-march=x86-64']
  ignore line: [ as -v --64 -o CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o /tmp/cc6sJ5RT.s]
  ignore line: [GNU assembler version 2.27 (x86_64-redhat-linux) using BFD version version 2.27-44.base.el7_9.1]
  ignore line: [COMPILER_PATH=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/]
  ignore line: [LIBRARY_PATH=/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../:/lib/:/usr/lib/]
  ignore line: [COLLECT_GCC_OPTIONS='-v' '-o' 'CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o' '-c' '-shared-libgcc' '-mtune=generic' '-march=x86-64']
  ignore line: [Linking CXX executable cmTC_fcd8d]
  ignore line: [/usr/bin/cmake3 -E cmake_link_script CMakeFiles/cmTC_fcd8d.dir/link.txt --verbose=1]
  ignore line: [/usr/bin/c++      -v CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o  -o cmTC_fcd8d ]
  ignore line: [Using built-in specs.]
  ignore line: [COLLECT_GCC=/usr/bin/c++]
  ignore line: [COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper]
  ignore line: [Target: x86_64-redhat-linux]
  ignore line: [Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c c++ objc obj-c++ java fortran ada go lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux]
  ignore line: [Thread model: posix]
  ignore line: [gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC) ]
  ignore line: [COMPILER_PATH=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/]
  ignore line: [LIBRARY_PATH=/usr/lib/gcc/x86_64-redhat-linux/4.8.5/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../:/lib/:/usr/lib/]
  ignore line: [COLLECT_GCC_OPTIONS='-v' '-o' 'cmTC_fcd8d' '-shared-libgcc' '-mtune=generic' '-march=x86-64']
  link line: [ /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/collect2 --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o cmTC_fcd8d /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o]
    arg [/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/collect2] ==> ignore
    arg [--build-id] ==> ignore
    arg [--no-add-needed] ==> ignore
    arg [--eh-frame-hdr] ==> ignore
    arg [--hash-style=gnu] ==> ignore
    arg [-m] ==> ignore
    arg [elf_x86_64] ==> ignore
    arg [-dynamic-linker] ==> ignore
    arg [/lib64/ld-linux-x86-64.so.2] ==> ignore
    arg [-o] ==> ignore
    arg [cmTC_fcd8d] ==> ignore
    arg [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o] ==> ignore
    arg [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o] ==> ignore
    arg [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o] ==> ignore
    arg [-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5] ==> dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5]
    arg [-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64] ==> dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64]
    arg [-L/lib/../lib64] ==> dir [/lib/../lib64]
    arg [-L/usr/lib/../lib64] ==> dir [/usr/lib/../lib64]
    arg [-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../..] ==> dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../..]
    arg [CMakeFiles/cmTC_fcd8d.dir/CMakeCXXCompilerABI.cpp.o] ==> ignore
    arg [-lstdc++] ==> lib [stdc++]
    arg [-lm] ==> lib [m]
    arg [-lgcc_s] ==> lib [gcc_s]
    arg [-lgcc] ==> lib [gcc]
    arg [-lc] ==> lib [c]
    arg [-lgcc_s] ==> lib [gcc_s]
    arg [-lgcc] ==> lib [gcc]
    arg [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o] ==> ignore
    arg [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o] ==> ignore
  collapse library dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5] ==> [/usr/lib/gcc/x86_64-redhat-linux/4.8.5]
  collapse library dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64] ==> [/usr/lib64]
  collapse library dir [/lib/../lib64] ==> [/lib64]
  collapse library dir [/usr/lib/../lib64] ==> [/usr/lib64]
  collapse library dir [/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../..] ==> [/usr/lib]
  implicit libs: [stdc++;m;gcc_s;gcc;c;gcc_s;gcc]
  implicit dirs: [/usr/lib/gcc/x86_64-redhat-linux/4.8.5;/usr/lib64;/lib64;/usr/lib]
  implicit fwks: []

Detecting CXX [-std=c++1y] compiler features compiled with the following output:
Change Dir: ngen/cmake_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake cmTC_530e0/fast && gmake: Warning: File `Makefile' has modification time 0.32 s in the future
/usr/bin/gmake  -f CMakeFiles/cmTC_530e0.dir/build.make CMakeFiles/cmTC_530e0.dir/build
gmake[1]: Entering directory `ngen/cmake_build/CMakeFiles/CMakeTmp'
gmake[1]: Warning: File `CMakeFiles/cmTC_530e0.dir/flags.make' has modification time 0.31 s in the future
Building CXX object CMakeFiles/cmTC_530e0.dir/feature_tests.cxx.o
/usr/bin/c++    -std=c++1y -o CMakeFiles/cmTC_530e0.dir/feature_tests.cxx.o -c ngen/cmake_build/CMakeFiles/feature_tests.cxx
Linking CXX executable cmTC_530e0
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/cmTC_530e0.dir/link.txt --verbose=1
/usr/bin/c++       CMakeFiles/cmTC_530e0.dir/feature_tests.cxx.o  -o cmTC_530e0
gmake[1]: warning:  Clock skew detected.  Your build may be incomplete.
gmake[1]: Leaving directory `ngen/cmake_build/CMakeFiles/CMakeTmp'
gmake: warning:  Clock skew detected.  Your build may be incomplete.

    Feature record: CXX_FEATURE:1cxx_template_template_parameters
    Feature record: CXX_FEATURE:1cxx_alias_templates
    Feature record: CXX_FEATURE:1cxx_alignas
    Feature record: CXX_FEATURE:1cxx_alignof
    Feature record: CXX_FEATURE:1cxx_attributes
    Feature record: CXX_FEATURE:1cxx_auto_type
    Feature record: CXX_FEATURE:1cxx_constexpr
    Feature record: CXX_FEATURE:1cxx_decltype
    Feature record: CXX_FEATURE:1cxx_decltype_incomplete_return_types
    Feature record: CXX_FEATURE:1cxx_default_function_template_args
    Feature record: CXX_FEATURE:1cxx_defaulted_functions
    Feature record: CXX_FEATURE:1cxx_defaulted_move_initializers
    Feature record: CXX_FEATURE:1cxx_delegating_constructors
    Feature record: CXX_FEATURE:1cxx_deleted_functions
    Feature record: CXX_FEATURE:1cxx_enum_forward_declarations
    Feature record: CXX_FEATURE:1cxx_explicit_conversions
    Feature record: CXX_FEATURE:1cxx_extended_friend_declarations
    Feature record: CXX_FEATURE:1cxx_extern_templates
    Feature record: CXX_FEATURE:1cxx_final
    Feature record: CXX_FEATURE:1cxx_func_identifier
    Feature record: CXX_FEATURE:1cxx_generalized_initializers
    Feature record: CXX_FEATURE:1cxx_inheriting_constructors
    Feature record: CXX_FEATURE:1cxx_inline_namespaces
    Feature record: CXX_FEATURE:1cxx_lambdas
    Feature record: CXX_FEATURE:1cxx_local_type_template_args
    Feature record: CXX_FEATURE:1cxx_long_long_type
    Feature record: CXX_FEATURE:1cxx_noexcept
    Feature record: CXX_FEATURE:1cxx_nonstatic_member_init
    Feature record: CXX_FEATURE:1cxx_nullptr
    Feature record: CXX_FEATURE:1cxx_override
    Feature record: CXX_FEATURE:1cxx_range_for
    Feature record: CXX_FEATURE:1cxx_raw_string_literals
    Feature record: CXX_FEATURE:1cxx_reference_qualified_functions
    Feature record: CXX_FEATURE:1cxx_right_angle_brackets
    Feature record: CXX_FEATURE:1cxx_rvalue_references
    Feature record: CXX_FEATURE:1cxx_sizeof_member
    Feature record: CXX_FEATURE:1cxx_static_assert
    Feature record: CXX_FEATURE:1cxx_strong_enums
    Feature record: CXX_FEATURE:1cxx_thread_local
    Feature record: CXX_FEATURE:1cxx_trailing_return_types
    Feature record: CXX_FEATURE:1cxx_unicode_literals
    Feature record: CXX_FEATURE:1cxx_uniform_initialization
    Feature record: CXX_FEATURE:1cxx_unrestricted_unions
    Feature record: CXX_FEATURE:1cxx_user_literals
    Feature record: CXX_FEATURE:1cxx_variadic_macros
    Feature record: CXX_FEATURE:1cxx_variadic_templates
    Feature record: CXX_FEATURE:0cxx_aggregate_default_initializers
    Feature record: CXX_FEATURE:0cxx_attribute_deprecated
    Feature record: CXX_FEATURE:0cxx_binary_literals
    Feature record: CXX_FEATURE:0cxx_contextual_conversions
    Feature record: CXX_FEATURE:0cxx_decltype_auto
    Feature record: CXX_FEATURE:0cxx_digit_separators
    Feature record: CXX_FEATURE:0cxx_generic_lambdas
    Feature record: CXX_FEATURE:0cxx_lambda_init_captures
    Feature record: CXX_FEATURE:0cxx_relaxed_constexpr
    Feature record: CXX_FEATURE:0cxx_return_type_deduction
    Feature record: CXX_FEATURE:0cxx_variable_templates

Expected behavior

Ability to build and run basic NGEN tutorial on NWC Linux machines.

ywang5002 commented 1 year ago

I run it on Red Hat Enterprise Linux 8 and build and run based on https://github.com/NOAA-OWP/ngen/blob/master/INSTALL.md. I got problems and fixed locally. Generation step: cmake -DCMAKE_BUILD_TYPE=Debug -DPACKAGE_TESTS:BOOL=ON -DBMI_C_LIB_ACTIVE:BOOL=ON -DBOOST_ROOT=/home/ec2-user/ngen/boost_1_72_0 -B ./cmake_build -S . Build step: cmake --build ./cmake_build I build all and skip the --target option. The build directory must be cmake_build because the code expects that this is the build directory. I have downloaded and installed boost_1_72_0 to /home/ec2-user/ngen/boost_1_72_0

hellkite500 commented 1 year ago

@jarq6c two things to consider. First, if there is clock skew happening, contact your sys admin.

Second, while we supported gcc 4.8.5 at one point in time, it may no longer be sufficient. try doing this first to load a slightly newer compiler in you shell environment

scl enable devtoolset-8 bash

then try the build.

jarq6c commented 1 year ago

I haven't tried to run NGEN since submitting this ticket. I'll try again later when it's a bit easier for dummies like me to run it. Thanks for the suggestions. :)