Fail creating the multigeneBLAST database

[tiagolbiotech]

While running make INPUTDIR='../Tests/PAL_July06/antiSMASH_input/' MULTIGENEBLASTDIR='../multigeneblast/' ALL, the script fails to find the gene clusters (.gbk files) to be included in the database. The following message is displayed

mkdir -p `dirname ../outputs/tables/PAL_db`
export PATH="/Users/Tiago/anaconda2/bin:/Users/Tiago/anaconda2/bin:/Users/Tiago/anaconda/bin:/opt/local/bin:/opt/local/sbin:/usr/local/bin:/usr/bin:/bin:/usr/bin/multigeneblast_1.1.13:/usr/sbin:/sbin:/usr/bin/EMBOSS-6.6.0/emboss:/usr/bin/standard-RAxML-master:/usr/bin/ncbi-blast-2.2.30+/bin:/opt/X11/bin:/usr/local/ncbi/blast/bin:/usr/local/mysql/bin:/usr/local/bin/MEGAN:../multigeneblast/"; \
    python ../multigeneblast//makedb.py ../outputs/tables/PAL_db \
        `find ../database_clusters -name '*gbk' | awk '{print $0}' ORS=' '`

    MAKEDB usage:

    Please specify database name and either one or more input files or a folder with input files.
    Usage for files: 'makedb dbname yourfile1.gbk yourfile2.gbk'
    Usage for folder: 'makedb dbname <folder name with input files>'

make[1]: *** [../outputs/tables/PAL_db] Error 1
make: *** [ALL] Error 2

[castelao]

@tiagolbiotech reported that it have been running OK, so I'm closing this.

This Makefile procedure is being replaced anyways.