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NREL / rex

REsource eXtraction Tool (rex)
https://nrel.github.io/rex
BSD 3-Clause "New" or "Revised" License
19 stars 10 forks source link

Missing YAML? #125

Closed ryancoe closed 2 years ago

ryancoe commented 2 years ago

Bug Description Looks like pyyaml should be included in setup.py?

In [1]: from rex import WaveX
---------------------------------------------------------------------------
ModuleNotFoundError                       Traceback (most recent call last)
Input In [1], in <cell line: 1>()
----> 1 from rex import WaveX

File ~/anaconda3/envs/rex/lib/python3.10/site-packages/rex/__init__.py:8, in <module>
      5 from __future__ import print_function, division, absolute_import
      6 import os
----> 8 from rex.joint_pd import JointPD
      9 from rex.multi_file_resource import (MultiFileNSRDB, MultiFileResource,
     10                                      MultiFileWTK)
     11 from rex.multi_time_resource import (MultiTimeNSRDB, MultiTimeResource,
     12                                      MultiTimeWaveResource,
     13                                      MultiTimeWindResource)

File ~/anaconda3/envs/rex/lib/python3.10/site-packages/rex/joint_pd/__init__.py:5, in <module>
      1 # -*- coding: utf-8 -*-
      2 """
      3 Resource joint probability distribution (JointPD) calculators
      4 """
----> 5 from .joint_pd import JointPD

File ~/anaconda3/envs/rex/lib/python3.10/site-packages/rex/joint_pd/joint_pd.py:15, in <module>
     12 from warnings import warn
     14 from rex.version import __version__
---> 15 from rex.renewable_resource import WindResource
     16 from rex.resource import Resource
     17 from rex.utilities.execution import SpawnProcessPool

File ~/anaconda3/envs/rex/lib/python3.10/site-packages/rex/renewable_resource.py:10, in <module>
      7 import pandas as pd
      8 import warnings
---> 10 from rex.resource import BaseResource
     11 from rex.sam_resource import SAMResource
     12 from rex.utilities.exceptions import (ResourceValueError, ExtrapolationWarning,
     13                                       ResourceWarning, ResourceRuntimeError,
     14                                       MoninObukhovExtrapolationError)

File ~/anaconda3/envs/rex/lib/python3.10/site-packages/rex/resource.py:11, in <module>
      8 import os
      9 import pandas as pd
---> 11 from rex.sam_resource import SAMResource
     12 from rex.utilities.parse_keys import parse_keys, parse_slice
     13 from rex.utilities.exceptions import ResourceKeyError, ResourceRuntimeError

File ~/anaconda3/envs/rex/lib/python3.10/site-packages/rex/sam_resource.py:11, in <module>
      8 from warnings import warn
      9 import logging
---> 11 from rex.utilities.exceptions import (ResourceKeyError, ResourceRuntimeError,
     12                                       ResourceValueError, SAMInputWarning)
     13 from rex.utilities.parse_keys import parse_keys
     14 from rex.utilities.solar_position import SolarPosition

File ~/anaconda3/envs/rex/lib/python3.10/site-packages/rex/utilities/__init__.py:5, in <module>
      1 # -*- coding: utf-8 -*-
      2 """
      3 rex utilities.
      4 """
----> 5 from .execution import SpawnProcessPool
      6 from .hpc import SLURM, PBS
      7 from .loggers import (init_logger, init_mult, setup_logger, log_mem,
      8                       log_versions, LOGGERS)

File ~/anaconda3/envs/rex/lib/python3.10/site-packages/rex/utilities/execution.py:16, in <module>
     13 import shlex
     14 from warnings import warn
---> 16 from rex.utilities.loggers import LOGGERS, log_mem
     17 from rex.utilities.exceptions import ExecutionError, ParallelExecutionWarning
     20 logger = logging.getLogger(__name__)

File ~/anaconda3/envs/rex/lib/python3.10/site-packages/rex/utilities/loggers.py:19, in <module>
     17 from rex.version import __version__
     18 from rex.utilities.exceptions import LoggerWarning
---> 19 from rex.utilities.utilities import unstupify_path
     21 FORMAT = '%(levelname)s - %(asctime)s [%(filename)s:%(lineno)d] : %(message)s'
     22 LOG_LEVEL = {'INFO': logging.INFO,
     23              'DEBUG': logging.DEBUG,
     24              'WARNING': logging.WARNING,
     25              'ERROR': logging.ERROR,
     26              'CRITICAL': logging.CRITICAL}

File ~/anaconda3/envs/rex/lib/python3.10/site-packages/rex/utilities/utilities.py:8, in <module>
      6 import inspect
      7 import json
----> 8 import yaml
      9 import os
     10 from fnmatch import fnmatch

ModuleNotFoundError: No module named 'yaml'
grantbuster commented 2 years ago

I think it is: https://github.com/NREL/rex/blob/289e742adf335219c9ae71552de271357353481f/requirements.txt#L7

ryancoe commented 2 years ago

hmmm. I did a conda install on macOS (10.15) and it is not getting installed.

# packages in environment at /Users/rcoe/anaconda3/envs/rex2:
#
# Name                    Version                   Build  Channel
bzip2                     1.0.8                h0d85af4_4    conda-forge
c-ares                    1.18.1               h0d85af4_0    conda-forge
ca-certificates           2021.10.8            h033912b_0    conda-forge
cached-property           1.5.2                hd8ed1ab_1    conda-forge
cached_property           1.5.2              pyha770c72_1    conda-forge
click                     8.1.2           py310h2ec42d9_0    conda-forge
h5py                      3.6.0           nompi_py310h47026f8_100    conda-forge
hdf5                      1.12.1          nompi_h0aa1fa2_104    conda-forge
krb5                      1.19.3               hb98e516_0    conda-forge
libblas                   3.9.0           13_osx64_openblas    conda-forge
libcblas                  3.9.0           13_osx64_openblas    conda-forge
libcurl                   7.82.0               h9dce1e3_0    conda-forge
libcxx                    13.0.1               hc203e6f_0    conda-forge
libedit                   3.1.20191231         h0678c8f_2    conda-forge
libev                     4.33                 haf1e3a3_1    conda-forge
libffi                    3.4.2                h0d85af4_5    conda-forge
libgfortran               5.0.0           9_3_0_h6c81a4c_23    conda-forge
libgfortran5              9.3.0               h6c81a4c_23    conda-forge
liblapack                 3.9.0           13_osx64_openblas    conda-forge
libnghttp2                1.47.0               hca56917_0    conda-forge
libopenblas               0.3.18          openmp_h3351f45_0    conda-forge
libssh2                   1.10.0               hd3787cc_2    conda-forge
libzlib                   1.2.11            h6c3fc93_1014    conda-forge
llvm-openmp               13.0.1               hcb1a161_1    conda-forge
ncurses                   6.3                  he49afe7_0    conda-forge
nrel-rex                  0.2.69                     py_0    nrel
numpy                     1.22.3          py310hb608527_1    conda-forge
openssl                   3.0.2                h6c3fc93_1    conda-forge
pandas                    1.4.2           py310h514ec25_0    conda-forge
pip                       22.0.4             pyhd8ed1ab_0    conda-forge
psutil                    5.9.0           py310h1961e1f_1    conda-forge
python                    3.10.4          h1cc4136_0_cpython    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python_abi                3.10                    2_cp310    conda-forge
pytz                      2022.1             pyhd8ed1ab_0    conda-forge
readline                  8.1                  h05e3726_0    conda-forge
scipy                     1.8.0           py310h47774c9_1    conda-forge
setuptools                61.3.1          py310h2ec42d9_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
sqlite                    3.37.1               hb516253_0    conda-forge
tk                        8.6.12               h5dbffcc_0    conda-forge
toml                      0.10.2             pyhd8ed1ab_0    conda-forge
tzdata                    2022a                h191b570_0    conda-forge
wheel                     0.37.1             pyhd8ed1ab_0    conda-forge
xz                        5.2.5                haf1e3a3_1    conda-forge
zlib                      1.2.11            h6c3fc93_1014    conda-forge
grantbuster commented 2 years ago

Oh gotcha. I must have forgotten to update the conda requirements. The conda install is not included in our automated test suite so that must have slipped through the cracks. I updated the conda req at the file below but the conda package wont be updated until the next release:

https://github.com/NREL/rex/blob/main/conda.recipe/meta.yaml