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NSLS-II-CSX / csxtools

Useful python tools for CSX (23-ID)
http://nsls-ii-csx.github.io/csxtools
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Add image functions #30

Closed stuwilkins closed 8 years ago

stuwilkins commented 8 years ago

Add useful image stack functions, this takes the mean of a nan stack of images

Attn @tacaswell @danielballan

stuwilkins commented 8 years ago

@tacaswell @danielballan

Performance results on xf23id1-srv2

http://nbviewer.jupyter.org/gist/stuwilkins/8bcd1454ecc55737d062

stuwilkins commented 8 years ago

@danielballan the tests are failing because of pims.pipeline is there a new version externally for PIMS that fixes this so the tests build?

danielballan commented 8 years ago

As a workaround, add the soft-matter conda channel or just install with pip.

Also @ericdill could you update PIMS in lightsource2 channel?

stuwilkins commented 8 years ago

Thanks @danielballan I will wait for @ericdill to put on the correct channel. I have manually run the tests for this this time.

stuwilkins commented 8 years ago

Thanks to @ericdill we found some cyclic dependence with pims which is fixed in this PR.

danielballan commented 8 years ago

This looks good. Ready to merge?

stuwilkins commented 8 years ago

yes, looks good. Merging!