STY: enable `flake8` checks

mrakitin commented 4 months ago

This way we capture more potential issues.

Although, the number of flake8 errors is significant, many of them are repeating, such as:

...
pyCHX/XPCS_SAXS.py:240:10: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:241:12: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:242:12: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:243:12: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:244:18: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:245:17: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:246:17: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:248:28: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:250:42: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:250:76: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:252:22: F405 'roi' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:253:16: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:254:12: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:256:16: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:258:5: E741 ambiguous variable name 'l'
pyCHX/XPCS_SAXS.py:260:15: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:262:27: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:271:20: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:273:22: F405 'roi' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:274:16: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:275:12: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:276:16: F405 'np' may be undefined, or defined from star imports: pyCHX.chx_generic_functions
pyCHX/XPCS_SAXS.py:277:5: E741 ambiguous variable name 'l'
...

thomaswmorris commented 4 months ago

How much should be refactoring code to fix the linting issues, and how much should be just excluding files from flake? A lot of the scripts don't seem like they were meant to be submodules but rather just profile scripts. Should I make/add them to a /scripts directory?

yugangzhang commented 4 months ago

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From: Thomas Morris @.> Sent: Monday, May 6, 2024 2:32:48 PM To: NSLS-II/pyCHX @.> Cc: Subscribed @.***> Subject: Re: [NSLS-II/pyCHX] STY: enable flake8 checks (PR #84)

How much should be refactoring code to fix the linting issues, and how much should be just excluding files from flake? A lot of the scripts don't seem like they were meant to be submodules but rather just profile scripts. Should I make/add them to a /scripts directory?

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thomaswmorris commented 3 months ago

See #88, most of it was automated so testing is needed.

NSLS-II / pyCHX

STY: enable `flake8` checks #84