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NVIDIA-Genomics-Research / AtacWorks

Deep learning based processing of Atac-seq data
https://clara-parabricks.github.io/AtacWorks/
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Add entry point script to atacworks #172

Closed ntadimeti closed 4 years ago

ntadimeti commented 4 years ago

Add entry point script.

Now atacworks can be run as follows:

atacworks [train/denoise/eval] --input_files <> --intervals_file <> --sizes_file <> --weights_path <>

ntadimeti commented 4 years ago

Changes to modularize the get_intervals and bw2h5 will be addressed as a separate PR