mouse reference

[elffairy90]

Hi,

Just a quick question, where can I find the reference genome for mice (mm10) that's equivalent to hg19.auto.sizes file? Best regards, Jenny

[avantikalal]

Hi @elffairy90 , you can find the full chromosome sizes file for mm10 here: https://github.com/igvteam/igv/blob/master/genomes/sizes/mm10.chrom.sizes

Simply take the rows corresponding to autosomes (chr1-19).

[elffairy90]

Hi Avantikalal,

Thank you very much!!! This is super helpful!