NVIDIA-Genomics-Research / GenomeWorks

SDK for GPU accelerated genome assembly and analysis
https://clara-parabricks.github.io/GenomeWorks/
Apache License 2.0
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[cudaaligner] Tests should load data from file #505

Open ahehn-nv opened 4 years ago

ahehn-nv commented 4 years ago

cudaaligner's tests use hard coded test data. This data should be loaded from data file(s) instead (like cudamapper).

cudaaligner's hard coded data: https://github.com/clara-parabricks/GenomeWorks/blob/dev-v0.5.0/cudaaligner/tests/cudaaligner_test_cases.cpp

cudamapper's data and tests: https://github.com/clara-parabricks/GenomeWorks/tree/dev-v0.5.0/cudamapper/data and https://github.com/clara-parabricks/GenomeWorks/tree/dev-v0.5.0/cudamapper/tests