NVIDIA-Genomics-Research / GenomeWorks

SDK for GPU accelerated genome assembly and analysis
https://clara-parabricks.github.io/GenomeWorks/
Apache License 2.0
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[pygw] add alignment visualizer tool #588

Closed tijyojwad closed 3 years ago

tijyojwad commented 3 years ago

adding a small tool to visualize cigar strings for pairwise alignments

tijyojwad commented 3 years ago

@o8191 Can you have a look at why the CentOS 7 job failed? Appears to be an issue with installing lumpy, but that seems odd...

ohadmo commented 3 years ago

@o8191 Can you have a look at why the CentOS 7 job failed? Appears to be an issue with installing lumpy, but that seems odd...

It seems this issue started to happen since we updated our images in docker hub, we can see this in the nightly builds: https://gpuci.gpuopenanalytics.com/job/clara-genomics/job/gpuci/job/clara-genomics-analysis/job/branches/job/clara-genomics-analysis-branch-pipeline/ I'm looking into it

ohadmo commented 3 years ago
ohadmo commented 3 years ago

rerun tests