NVIDIA-Genomics-Research / GenomeWorks

SDK for GPU accelerated genome assembly and analysis
https://clara-parabricks.github.io/GenomeWorks/
Apache License 2.0
286 stars 76 forks source link

[cudaaligner] Disabled caching device-allocator may trigger OOM in cudaaligner #630

Open ahehn-nv opened 3 years ago

ahehn-nv commented 3 years ago

AlignerGlobalMyersBanded's reset_max_bandwidth(...) runs out of device memory when the caching device-allocator is disabled at compilation. (This allocator is enabled by default.) It is unclear if cudaaligner respects the max_device_memory setting passed at construction at all in this case.