Open iiSeymour opened 3 years ago
When creating a CudaPoaBatch object a default logger is initialized and outputs to stderr.
CudaPoaBatch
stderr
>>> from genomeworks.cudapoa import CudaPoaBatch >>> CudaPoaBatch(1000, 1000, 3724032) GenomeWorks logger not initialized yet. Initializing default logger now. Initialized GenomeWorks logger with log level ERROR
Can the logger be initialized from Python with a stream to avoid this output?
cudapoa also outputs to stdout which can go unseen and corrupt output formats (fastx, sam, ect).
@ohadmo @EpiSlim can we add an option to disable logging completely?
When creating a
CudaPoaBatch
object a default logger is initialized and outputs tostderr
.Can the logger be initialized from Python with a stream to avoid this output?