I am running the Example 4: Droplet Single-cell ATAC-seq of 60K Bone Marrow Cells demo data in a GPU cluster in Google Cloud. All the codes ran perfectly well around a month ago. Now, I am re-running the exact codes again with the exact same demo data (Example 4), but I am encountering TypeError: rank_genes_groups() got multiple values for argument 'groups' during "Find Differential Peaks" step. I am attaching the screenshot here. Can anybody help why this is happening now and how I can clear this error?
I am running the Example 4: Droplet Single-cell ATAC-seq of 60K Bone Marrow Cells demo data in a GPU cluster in Google Cloud. All the codes ran perfectly well around a month ago. Now, I am re-running the exact codes again with the exact same demo data (Example 4), but I am encountering TypeError: rank_genes_groups() got multiple values for argument 'groups' during "Find Differential Peaks" step. I am attaching the screenshot here. Can anybody help why this is happening now and how I can clear this error?