cell number limit: data point for 10M and 70M dataset

NVIDIA-Genomics-Research / rapids-single-cell-examples

Examples of single-cell genomic analysis accelerated with RAPIDS

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cell number limit: data point for 10M and 70M dataset #119

Open yubin-ai opened 11 months ago

yubin-ai commented 11 months ago

hardware: 24G memory GPU 10M dataset: 30min for KNN, 30min for UMAP, 3min for Leiden 70M dataset: not sure if it is feasible due to memory limit - 15h for KNN and still running.

is there any solution/tip for >10M dataset?