benfred
commented
3 years ago The --user flag has also caused problems like https://github.com/NVIDIA-Merlin/Merlin/issues/57 . I think we should remove if possible.
Closed mengdong closed 3 years ago
benfred
commented
3 years ago The --user flag has also caused problems like https://github.com/NVIDIA-Merlin/Merlin/issues/57 . I think we should remove if possible.
mengdong
commented
3 years ago @albert17 @benfred , could we refresh the 21.11 images to includes this fix? This blocks deploy Merlin in Vertex. Thanks!
albert17
commented
3 years ago @mengdong Created PR #64 to address this problem. We cannot refresh 21.11 container, but the nightly containers will have this change when merged.
nvidia-merlin-bot
commented
1 year ago GitHub pull request #62 of commit 2a130987905e7bc73542a10742cbb6fbbc0ccd71, no merge conflicts.
Running as SYSTEM
Setting status of 2a130987905e7bc73542a10742cbb6fbbc0ccd71 to PENDING with url http://merlin-infra1.nvidia.com:8080/job/merlin_dataloader/84/ and message: 'Pending'
Using context: Jenkins
Building on master in workspace /var/jenkins_home/workspace/merlin_dataloader
using credential systems-login
> git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/NVIDIA-Merlin/dataloader # timeout=10
Fetching upstream changes from https://github.com/NVIDIA-Merlin/dataloader
> git --version # timeout=10
using GIT_ASKPASS to set credentials login for merlin-systems
> git fetch --tags --force --progress -- https://github.com/NVIDIA-Merlin/dataloader +refs/pull/62/*:refs/remotes/origin/pr/62/* # timeout=10
> git rev-parse 2a130987905e7bc73542a10742cbb6fbbc0ccd71^{commit} # timeout=10
Checking out Revision 2a130987905e7bc73542a10742cbb6fbbc0ccd71 (detached)
> git config core.sparsecheckout # timeout=10
> git checkout -f 2a130987905e7bc73542a10742cbb6fbbc0ccd71 # timeout=10
Commit message: "Add test for loading time of list features"
> git rev-list --no-walk abba6da599ada419761eda492d0eeba49eaa711e # timeout=10
[merlin_dataloader] $ /bin/bash /tmp/jenkins2594688551023438258.sh
GLOB sdist-make: /var/jenkins_home/workspace/merlin_dataloader/dataloader/setup.py
test-gpu recreate: /var/jenkins_home/workspace/merlin_dataloader/dataloader/.tox/test-gpu
test-gpu installdeps: -rrequirements/dev.txt, pytest, pytest-cov
WARNING: Discarding $PYTHONPATH from environment, to override specify PYTHONPATH in 'passenv' in your configuration.
test-gpu inst: /var/jenkins_home/workspace/merlin_dataloader/dataloader/.tox/.tmp/package/1/merlin-dataloader-0.0.2+13.g2a13098.zip
WARNING: Discarding $PYTHONPATH from environment, to override specify PYTHONPATH in 'passenv' in your configuration.
test-gpu installed: absl-py==1.2.0,aiohttp==3.8.1,aiosignal==1.2.0,alabaster==0.7.12,alembic==1.8.1,anyio==3.6.1,argon2-cffi==21.3.0,argon2-cffi-bindings==21.2.0,astroid==2.5.6,asttokens==2.0.8,astunparse==1.6.3,asv==0.5.1,asvdb==0.4.2,async-timeout==4.0.2,attrs==22.1.0,autopage==0.5.1,awscli==1.27.16,Babel==2.10.3,backcall==0.2.0,beautifulsoup4==4.11.1,betterproto==1.2.5,black==22.6.0,bleach==5.0.1,boto3==1.24.75,botocore==1.29.16,Brotli==1.0.9,cachetools==5.2.0,certifi==2019.11.28,cffi==1.15.1,chardet==3.0.4,charset-normalizer==2.1.1,clang==5.0,click==8.1.3,cliff==4.1.0,cloudpickle==2.2.0,cmaes==0.9.0,cmake==3.24.1.1,cmd2==2.4.2,colorama==0.4.4,colorlog==6.7.0,contourpy==1.0.5,coverage==6.5.0,cpplint==1.6.1,cryptography==38.0.3,cuda-python==11.7.1,cupy-cuda117==10.6.0,cycler==0.11.0,Cython==0.29.32,dask==2022.1.1,dbus-python==1.2.16,debugpy==1.6.3,decorator==5.1.1,defusedxml==0.7.1,dill==0.3.5.1,distlib==0.3.6,distributed==2022.5.1,distro==1.7.0,dm-tree==0.1.6,docker-pycreds==0.4.0,docutils==0.16,emoji==1.7.0,entrypoints==0.4,execnet==1.9.0,executing==1.0.0,faiss==1.7.2,faiss-gpu==1.7.2,fastai==2.7.9,fastapi==0.85.0,fastavro==1.6.1,fastcore==1.5.27,fastdownload==0.0.7,fastjsonschema==2.16.1,fastprogress==1.0.3,fastrlock==0.8,feast==0.19.4,fiddle==0.2.2,filelock==3.8.0,flatbuffers==1.12,fonttools==4.37.3,frozenlist==1.3.1,fsspec==2022.5.0,gast==0.4.0,gevent==21.12.0,geventhttpclient==2.0.2,gitdb==4.0.9,GitPython==3.1.27,google==3.0.0,google-api-core==2.10.1,google-auth==2.11.1,google-auth-oauthlib==0.4.6,google-pasta==0.2.0,googleapis-common-protos==1.52.0,graphviz==0.20.1,greenlet==1.1.3,grpcio==1.41.0,grpcio-channelz==1.49.0,grpcio-reflection==1.48.1,grpclib==0.4.3,h11==0.13.0,h2==4.1.0,h5py==3.7.0,HeapDict==1.0.1,horovod==0.26.1,hpack==4.0.0,httptools==0.5.0,hugectr2onnx==0.0.0,huggingface-hub==0.9.1,hyperframe==6.0.1,idna==2.8,imagesize==1.4.1,implicit==0.6.1,importlib-metadata==4.12.0,importlib-resources==5.9.0,iniconfig==1.1.1,ipykernel==6.15.3,ipython==8.5.0,ipython-genutils==0.2.0,ipywidgets==7.7.0,jedi==0.18.1,Jinja2==3.1.2,jmespath==1.0.1,joblib==1.2.0,json5==0.9.10,jsonschema==4.16.0,jupyter-cache==0.4.3,jupyter-core==4.11.1,jupyter-server==1.18.1,jupyter-server-mathjax==0.2.5,jupyter-sphinx==0.3.2,jupyter_client==7.3.5,jupyterlab==3.4.7,jupyterlab-pygments==0.2.2,jupyterlab-widgets==1.1.0,jupyterlab_server==2.15.1,keras==2.9.0,Keras-Preprocessing==1.1.2,kiwisolver==1.4.4,lazy-object-proxy==1.8.0,libclang==14.0.6,libcst==0.4.7,lightfm==1.16,lightgbm==3.3.2,linkify-it-py==1.0.3,llvmlite==0.39.1,locket==1.0.0,lxml==4.9.1,Mako==1.2.4,Markdown==3.4.1,markdown-it-py==1.1.0,MarkupSafe==2.1.1,matplotlib==3.6.0,matplotlib-inline==0.1.6,mdit-py-plugins==0.2.8,merlin-core==0.6.0+1.g5926fcf,merlin-dataloader==0.0.2+13.g2a13098,merlin-models==0.7.0+11.g280956aa4,merlin-systems==0.5.0+4.g15074ad,mistune==2.0.4,mmh3==3.0.0,moto==4.0.10,mpi4py==3.1.3,msgpack==1.0.4,multidict==6.0.2,mypy-extensions==0.4.3,myst-nb==0.13.2,myst-parser==0.15.2,natsort==8.1.0,nbclassic==0.4.3,nbclient==0.6.8,nbconvert==7.0.0,nbdime==3.1.1,nbformat==5.5.0,nbsphinx==0.8.10,nest-asyncio==1.5.5,ninja==1.10.2.3,notebook==6.4.12,notebook-shim==0.1.0,npy-append-array==0.9.13,numba==0.56.2,numpy==1.22.4,nvidia-pyindex==1.0.9,# Editable install with no version control (nvtabular==1.4.0+8.g95e12d347),-e /usr/local/lib/python3.8/dist-packages,nvtx==0.2.5,oauthlib==3.2.1,oldest-supported-numpy==2022.8.16,onnx==1.12.0,onnxruntime==1.11.1,opt-einsum==3.3.0,optuna==3.0.3,packaging==21.3,pandas==1.3.5,pandavro==1.5.2,pandocfilters==1.5.0,parso==0.8.3,partd==1.3.0,pathtools==0.1.2,pbr==5.11.0,pexpect==4.8.0,pickleshare==0.7.5,Pillow==9.2.0,pkgutil_resolve_name==1.3.10,platformdirs==2.5.2,plotly==5.11.0,pluggy==1.0.0,prettytable==3.5.0,prometheus-client==0.14.1,promise==2.3,prompt-toolkit==3.0.31,proto-plus==1.19.6,protobuf==3.19.5,psutil==5.9.2,ptyprocess==0.7.0,pure-eval==0.2.2,py==1.11.0,pyarrow==7.0.0,pyasn1==0.4.8,pyasn1-modules==0.2.8,pybind11==2.10.0,pycparser==2.21,pydantic==1.10.2,pydot==1.4.2,Pygments==2.13.0,PyGObject==3.36.0,pynvml==11.4.1,pyparsing==3.0.9,pyperclip==1.8.2,pyrsistent==0.18.1,pytest==7.1.3,pytest-cov==4.0.0,pytest-xdist==3.0.2,python-apt==2.0.0+ubuntu0.20.4.8,python-dateutil==2.8.2,python-dotenv==0.21.0,python-rapidjson==1.8,pytz==2022.2.1,PyYAML==5.4.1,pyzmq==24.0.0,regex==2022.9.13,requests==2.22.0,requests-oauthlib==1.3.1,requests-unixsocket==0.2.0,responses==0.22.0,rsa==4.7.2,s3fs==2022.2.0,s3transfer==0.6.0,sacremoses==0.0.53,scikit-build==0.15.0,scikit-learn==1.1.2,scipy==1.8.1,seedir==0.3.0,Send2Trash==1.8.0,sentry-sdk==1.9.8,setproctitle==1.3.2,setuptools-scm==7.0.5,shortuuid==1.0.9,six==1.15.0,sklearn==0.0,smmap==5.0.0,sniffio==1.3.0,snowballstemmer==2.2.0,sortedcontainers==2.4.0,soupsieve==2.3.2.post1,Sphinx==5.3.0,sphinx-markdown-tables==0.0.15,sphinx-multiversion==0.2.4,sphinx-rtd-theme==1.1.1,sphinx-togglebutton==0.3.1,sphinx_external_toc==0.3.0,sphinxcontrib-applehelp==1.0.2,sphinxcontrib-copydirs @ git+https://github.com/mikemckiernan/sphinxcontrib-copydirs.git@8d23fdd32ee0b2f2d2ee091ac8eb8c1e88271dd4,sphinxcontrib-devhelp==1.0.2,sphinxcontrib-htmlhelp==2.0.0,sphinxcontrib-jsmath==1.0.1,sphinxcontrib-qthelp==1.0.3,sphinxcontrib-serializinghtml==1.1.5,SQLAlchemy==1.4.44,stack-data==0.5.0,starlette==0.20.4,stevedore==4.1.1,stringcase==1.2.0,supervisor==4.1.0,tabulate==0.8.10,tblib==1.7.0,tdqm==0.0.1,tenacity==8.0.1,tensorboard==2.9.1,tensorboard-data-server==0.6.1,tensorboard-plugin-wit==1.8.1,tensorflow==2.9.2,tensorflow-estimator==2.9.0,tensorflow-gpu==2.9.2,tensorflow-io-gcs-filesystem==0.27.0,tensorflow-metadata==1.10.0,termcolor==2.0.1,terminado==0.15.0,testbook==0.4.2,threadpoolctl==3.1.0,tinycss2==1.1.1,tokenizers==0.10.3,toml==0.10.2,tomli==2.0.1,toolz==0.12.0,torch==1.12.1+cu113,torchmetrics==0.3.2,tornado==6.2,tox==3.26.0,tqdm==4.64.1,traitlets==5.4.0,transformers==4.12.0,transformers4rec==0.1.12+2.gbcc939255,treelite==2.3.0,treelite-runtime==2.3.0,tritonclient==2.25.0,types-toml==0.10.8.1,typing-inspect==0.8.0,typing_extensions==4.3.0,uc-micro-py==1.0.1,urllib3==1.26.12,uvicorn==0.18.3,uvloop==0.17.0,versioneer==0.20,virtualenv==20.16.5,wandb==0.13.3,watchfiles==0.17.0,wcwidth==0.2.5,webencodings==0.5.1,websocket-client==1.4.1,websockets==10.3,Werkzeug==2.2.2,widgetsnbextension==3.6.0,wrapt==1.12.1,xgboost==1.6.2,xmltodict==0.13.0,yarl==1.8.1,zict==2.2.0,zipp==3.8.1,zope.event==4.5.0,zope.interface==5.4.0
test-gpu run-test-pre: PYTHONHASHSEED='2501779825'
test-gpu run-test: commands[0] | python -m pip install --upgrade git+https://github.com/NVIDIA-Merlin/core.git
Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
Collecting git+https://github.com/NVIDIA-Merlin/core.git
Cloning https://github.com/NVIDIA-Merlin/core.git to /tmp/pip-req-build-kiyfk8bo
Running command git clone --filter=blob:none --quiet https://github.com/NVIDIA-Merlin/core.git /tmp/pip-req-build-kiyfk8bo
Resolved https://github.com/NVIDIA-Merlin/core.git to commit 78f1f0b0952fd14b76913b0dd258565c06694abe
Installing build dependencies: started
Installing build dependencies: finished with status 'done'
Getting requirements to build wheel: started
Getting requirements to build wheel: finished with status 'done'
Preparing metadata (pyproject.toml): started
Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: tqdm>=4.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core==0.9.0+13.g78f1f0b) (4.64.1)
Requirement already satisfied: distributed>=2022.3.0 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core==0.9.0+13.g78f1f0b) (2022.3.0)
Requirement already satisfied: dask>=2022.3.0 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core==0.9.0+13.g78f1f0b) (2022.3.0)
Requirement already satisfied: numba>=0.54 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core==0.9.0+13.g78f1f0b) (0.55.1)
Requirement already satisfied: protobuf>=3.0.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core==0.9.0+13.g78f1f0b) (3.19.5)
Requirement already satisfied: packaging in /usr/local/lib/python3.8/dist-packages (from merlin-core==0.9.0+13.g78f1f0b) (21.3)
Requirement already satisfied: pandas<1.4.0dev0,>=1.2.0 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core==0.9.0+13.g78f1f0b) (1.3.5)
Requirement already satisfied: fsspec==2022.5.0 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core==0.9.0+13.g78f1f0b) (2022.5.0)
Requirement already satisfied: pyarrow>=5.0.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core==0.9.0+13.g78f1f0b) (7.0.0)
Requirement already satisfied: tensorflow-metadata>=1.2.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core==0.9.0+13.g78f1f0b) (1.10.0)
Requirement already satisfied: betterproto<2.0.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core==0.9.0+13.g78f1f0b) (1.2.5)
Requirement already satisfied: stringcase in /usr/local/lib/python3.8/dist-packages (from betterproto<2.0.0->merlin-core==0.9.0+13.g78f1f0b) (1.2.0)
Requirement already satisfied: grpclib in /usr/local/lib/python3.8/dist-packages (from betterproto<2.0.0->merlin-core==0.9.0+13.g78f1f0b) (0.4.3)
Requirement already satisfied: toolz>=0.8.2 in /usr/local/lib/python3.8/dist-packages (from dask>=2022.3.0->merlin-core==0.9.0+13.g78f1f0b) (0.12.0)
Requirement already satisfied: pyyaml>=5.3.1 in /var/jenkins_home/.local/lib/python3.8/site-packages/PyYAML-5.4.1-py3.8-linux-x86_64.egg (from dask>=2022.3.0->merlin-core==0.9.0+13.g78f1f0b) (5.4.1)
Requirement already satisfied: partd>=0.3.10 in /var/jenkins_home/.local/lib/python3.8/site-packages/partd-1.2.0-py3.8.egg (from dask>=2022.3.0->merlin-core==0.9.0+13.g78f1f0b) (1.2.0)
Requirement already satisfied: cloudpickle>=1.1.1 in /usr/local/lib/python3.8/dist-packages (from dask>=2022.3.0->merlin-core==0.9.0+13.g78f1f0b) (2.2.0)
Requirement already satisfied: jinja2 in ./.tox/test-gpu/lib/python3.8/site-packages (from distributed>=2022.3.0->merlin-core==0.9.0+13.g78f1f0b) (3.0.3)
Requirement already satisfied: tornado>=6.0.3 in ./.tox/test-gpu/lib/python3.8/site-packages (from distributed>=2022.3.0->merlin-core==0.9.0+13.g78f1f0b) (6.2)
Requirement already satisfied: msgpack>=0.6.0 in /usr/local/lib/python3.8/dist-packages (from distributed>=2022.3.0->merlin-core==0.9.0+13.g78f1f0b) (1.0.4)
Requirement already satisfied: click>=6.6 in /usr/local/lib/python3.8/dist-packages (from distributed>=2022.3.0->merlin-core==0.9.0+13.g78f1f0b) (8.1.3)
Requirement already satisfied: sortedcontainers!=2.0.0,!=2.0.1 in /var/jenkins_home/.local/lib/python3.8/site-packages/sortedcontainers-2.4.0-py3.8.egg (from distributed>=2022.3.0->merlin-core==0.9.0+13.g78f1f0b) (2.4.0)
Requirement already satisfied: tblib>=1.6.0 in /var/jenkins_home/.local/lib/python3.8/site-packages/tblib-1.7.0-py3.8.egg (from distributed>=2022.3.0->merlin-core==0.9.0+13.g78f1f0b) (1.7.0)
Requirement already satisfied: zict>=0.1.3 in /var/jenkins_home/.local/lib/python3.8/site-packages/zict-2.0.0-py3.8.egg (from distributed>=2022.3.0->merlin-core==0.9.0+13.g78f1f0b) (2.0.0)
Requirement already satisfied: psutil>=5.0 in /var/jenkins_home/.local/lib/python3.8/site-packages/psutil-5.8.0-py3.8-linux-x86_64.egg (from distributed>=2022.3.0->merlin-core==0.9.0+13.g78f1f0b) (5.8.0)
Requirement already satisfied: llvmlite<0.39,>=0.38.0rc1 in ./.tox/test-gpu/lib/python3.8/site-packages (from numba>=0.54->merlin-core==0.9.0+13.g78f1f0b) (0.38.1)
Requirement already satisfied: numpy<1.22,>=1.18 in /var/jenkins_home/.local/lib/python3.8/site-packages (from numba>=0.54->merlin-core==0.9.0+13.g78f1f0b) (1.20.3)
Requirement already satisfied: setuptools in ./.tox/test-gpu/lib/python3.8/site-packages (from numba>=0.54->merlin-core==0.9.0+13.g78f1f0b) (65.5.1)
Requirement already satisfied: pyparsing!=3.0.5,>=2.0.2 in /usr/local/lib/python3.8/dist-packages (from packaging->merlin-core==0.9.0+13.g78f1f0b) (3.0.9)
Requirement already satisfied: pytz>=2017.3 in /usr/local/lib/python3.8/dist-packages (from pandas<1.4.0dev0,>=1.2.0->merlin-core==0.9.0+13.g78f1f0b) (2022.2.1)
Requirement already satisfied: python-dateutil>=2.7.3 in /usr/local/lib/python3.8/dist-packages (from pandas<1.4.0dev0,>=1.2.0->merlin-core==0.9.0+13.g78f1f0b) (2.8.2)
Requirement already satisfied: googleapis-common-protos<2,>=1.52.0 in /usr/local/lib/python3.8/dist-packages (from tensorflow-metadata>=1.2.0->merlin-core==0.9.0+13.g78f1f0b) (1.52.0)
Requirement already satisfied: absl-py<2.0.0,>=0.9 in /usr/local/lib/python3.8/dist-packages (from tensorflow-metadata>=1.2.0->merlin-core==0.9.0+13.g78f1f0b) (1.2.0)
Requirement already satisfied: locket in /var/jenkins_home/.local/lib/python3.8/site-packages/locket-0.2.1-py3.8.egg (from partd>=0.3.10->dask>=2022.3.0->merlin-core==0.9.0+13.g78f1f0b) (0.2.1)
Requirement already satisfied: six>=1.5 in /var/jenkins_home/.local/lib/python3.8/site-packages (from python-dateutil>=2.7.3->pandas<1.4.0dev0,>=1.2.0->merlin-core==0.9.0+13.g78f1f0b) (1.15.0)
Requirement already satisfied: heapdict in /var/jenkins_home/.local/lib/python3.8/site-packages/HeapDict-1.0.1-py3.8.egg (from zict>=0.1.3->distributed>=2022.3.0->merlin-core==0.9.0+13.g78f1f0b) (1.0.1)
Requirement already satisfied: h2<5,>=3.1.0 in /usr/local/lib/python3.8/dist-packages (from grpclib->betterproto<2.0.0->merlin-core==0.9.0+13.g78f1f0b) (4.1.0)
Requirement already satisfied: multidict in /usr/local/lib/python3.8/dist-packages (from grpclib->betterproto<2.0.0->merlin-core==0.9.0+13.g78f1f0b) (6.0.2)
Requirement already satisfied: MarkupSafe>=2.0 in ./.tox/test-gpu/lib/python3.8/site-packages (from jinja2->distributed>=2022.3.0->merlin-core==0.9.0+13.g78f1f0b) (2.0.1)
Requirement already satisfied: hpack<5,>=4.0 in /usr/local/lib/python3.8/dist-packages (from h2<5,>=3.1.0->grpclib->betterproto<2.0.0->merlin-core==0.9.0+13.g78f1f0b) (4.0.0)
Requirement already satisfied: hyperframe<7,>=6.0 in /usr/local/lib/python3.8/dist-packages (from h2<5,>=3.1.0->grpclib->betterproto<2.0.0->merlin-core==0.9.0+13.g78f1f0b) (6.0.1)
Building wheels for collected packages: merlin-core
Building wheel for merlin-core (pyproject.toml): started
Building wheel for merlin-core (pyproject.toml): finished with status 'done'
Created wheel for merlin-core: filename=merlin_core-0.9.0+13.g78f1f0b-py3-none-any.whl size=118889 sha256=430481d680ac8608e99e148f5cfe050d6e638b4c1bc0bc05382c2c6e2aa05d9a
Stored in directory: /tmp/pip-ephem-wheel-cache-u1yyag01/wheels/c8/38/16/a6968787eafcec5fa772148af8408b089562f71af0752e8e84
Successfully built merlin-core
Installing collected packages: merlin-core
Attempting uninstall: merlin-core
Found existing installation: merlin-core 0.3.0+12.g78ecddd
Not uninstalling merlin-core at /var/jenkins_home/.local/lib/python3.8/site-packages, outside environment /var/jenkins_home/workspace/merlin_dataloader/dataloader/.tox/test-gpu
Can't uninstall 'merlin-core'. No files were found to uninstall.
Successfully installed merlin-core-0.9.0+13.g78f1f0b
test-gpu run-test: commands[1] | python -m pip install --upgrade git+https://github.com/NVIDIA-Merlin/nvtabular.git
Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
Collecting git+https://github.com/NVIDIA-Merlin/nvtabular.git
Cloning https://github.com/NVIDIA-Merlin/nvtabular.git to /tmp/pip-req-build-sev0y78k
Running command git clone --filter=blob:none --quiet https://github.com/NVIDIA-Merlin/nvtabular.git /tmp/pip-req-build-sev0y78k
Resolved https://github.com/NVIDIA-Merlin/nvtabular.git to commit ff186c6fac1bca957d4edd76e8e81c77ca6a649e
Installing build dependencies: started
Installing build dependencies: finished with status 'done'
Getting requirements to build wheel: started
Getting requirements to build wheel: finished with status 'done'
Preparing metadata (pyproject.toml): started
Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: merlin-core>=0.2.0 in ./.tox/test-gpu/lib/python3.8/site-packages (from nvtabular==1.6.0+10.gff186c6f) (0.9.0+13.g78f1f0b)
Requirement already satisfied: merlin-dataloader>=0.0.2 in ./.tox/test-gpu/lib/python3.8/site-packages (from nvtabular==1.6.0+10.gff186c6f) (0.0.2+13.g2a13098)
Requirement already satisfied: scipy in /usr/local/lib/python3.8/dist-packages (from nvtabular==1.6.0+10.gff186c6f) (1.8.1)
Requirement already satisfied: tqdm>=4.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (4.64.1)
Requirement already satisfied: distributed>=2022.3.0 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (2022.3.0)
Requirement already satisfied: dask>=2022.3.0 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (2022.3.0)
Requirement already satisfied: numba>=0.54 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (0.55.1)
Requirement already satisfied: protobuf>=3.0.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (3.19.5)
Requirement already satisfied: packaging in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (21.3)
Requirement already satisfied: pandas<1.4.0dev0,>=1.2.0 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (1.3.5)
Requirement already satisfied: fsspec==2022.5.0 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (2022.5.0)
Requirement already satisfied: pyarrow>=5.0.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (7.0.0)
Requirement already satisfied: tensorflow-metadata>=1.2.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (1.10.0)
Requirement already satisfied: betterproto<2.0.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (1.2.5)
Requirement already satisfied: numpy<1.25.0,>=1.17.3 in /var/jenkins_home/.local/lib/python3.8/site-packages (from scipy->nvtabular==1.6.0+10.gff186c6f) (1.20.3)
Requirement already satisfied: stringcase in /usr/local/lib/python3.8/dist-packages (from betterproto<2.0.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (1.2.0)
Requirement already satisfied: grpclib in /usr/local/lib/python3.8/dist-packages (from betterproto<2.0.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (0.4.3)
Requirement already satisfied: toolz>=0.8.2 in /usr/local/lib/python3.8/dist-packages (from dask>=2022.3.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (0.12.0)
Requirement already satisfied: pyyaml>=5.3.1 in /var/jenkins_home/.local/lib/python3.8/site-packages/PyYAML-5.4.1-py3.8-linux-x86_64.egg (from dask>=2022.3.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (5.4.1)
Requirement already satisfied: partd>=0.3.10 in /var/jenkins_home/.local/lib/python3.8/site-packages/partd-1.2.0-py3.8.egg (from dask>=2022.3.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (1.2.0)
Requirement already satisfied: cloudpickle>=1.1.1 in /usr/local/lib/python3.8/dist-packages (from dask>=2022.3.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (2.2.0)
Requirement already satisfied: jinja2 in ./.tox/test-gpu/lib/python3.8/site-packages (from distributed>=2022.3.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (3.0.3)
Requirement already satisfied: tornado>=6.0.3 in ./.tox/test-gpu/lib/python3.8/site-packages (from distributed>=2022.3.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (6.2)
Requirement already satisfied: msgpack>=0.6.0 in /usr/local/lib/python3.8/dist-packages (from distributed>=2022.3.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (1.0.4)
Requirement already satisfied: click>=6.6 in /usr/local/lib/python3.8/dist-packages (from distributed>=2022.3.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (8.1.3)
Requirement already satisfied: sortedcontainers!=2.0.0,!=2.0.1 in /var/jenkins_home/.local/lib/python3.8/site-packages/sortedcontainers-2.4.0-py3.8.egg (from distributed>=2022.3.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (2.4.0)
Requirement already satisfied: tblib>=1.6.0 in /var/jenkins_home/.local/lib/python3.8/site-packages/tblib-1.7.0-py3.8.egg (from distributed>=2022.3.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (1.7.0)
Requirement already satisfied: zict>=0.1.3 in /var/jenkins_home/.local/lib/python3.8/site-packages/zict-2.0.0-py3.8.egg (from distributed>=2022.3.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (2.0.0)
Requirement already satisfied: psutil>=5.0 in /var/jenkins_home/.local/lib/python3.8/site-packages/psutil-5.8.0-py3.8-linux-x86_64.egg (from distributed>=2022.3.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (5.8.0)
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Requirement already satisfied: setuptools in ./.tox/test-gpu/lib/python3.8/site-packages (from numba>=0.54->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (65.5.1)
Requirement already satisfied: pyparsing!=3.0.5,>=2.0.2 in /usr/local/lib/python3.8/dist-packages (from packaging->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (3.0.9)
Requirement already satisfied: pytz>=2017.3 in /usr/local/lib/python3.8/dist-packages (from pandas<1.4.0dev0,>=1.2.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (2022.2.1)
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Requirement already satisfied: heapdict in /var/jenkins_home/.local/lib/python3.8/site-packages/HeapDict-1.0.1-py3.8.egg (from zict>=0.1.3->distributed>=2022.3.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (1.0.1)
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Requirement already satisfied: hpack<5,>=4.0 in /usr/local/lib/python3.8/dist-packages (from h2<5,>=3.1.0->grpclib->betterproto<2.0.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (4.0.0)
Requirement already satisfied: hyperframe<7,>=6.0 in /usr/local/lib/python3.8/dist-packages (from h2<5,>=3.1.0->grpclib->betterproto<2.0.0->merlin-core>=0.2.0->nvtabular==1.6.0+10.gff186c6f) (6.0.1)
Building wheels for collected packages: nvtabular
Building wheel for nvtabular (pyproject.toml): started
Building wheel for nvtabular (pyproject.toml): finished with status 'done'
Created wheel for nvtabular: filename=nvtabular-1.6.0+10.gff186c6f-cp38-cp38-linux_x86_64.whl size=257603 sha256=dbd324cccfd9a239546645fc17a983db2ad3001ec4e7472ab1d8f3efaaaa57c4
Stored in directory: /tmp/pip-ephem-wheel-cache-k6aimcbf/wheels/8f/d9/f9/30f2cdc5bf8787fae6fdfe55afd6e1b493e619ec32c32ec40b
Successfully built nvtabular
Installing collected packages: nvtabular
Attempting uninstall: nvtabular
Found existing installation: nvtabular 1.1.1
Not uninstalling nvtabular at /var/jenkins_home/.local/lib/python3.8/site-packages, outside environment /var/jenkins_home/workspace/merlin_dataloader/dataloader/.tox/test-gpu
Can't uninstall 'nvtabular'. No files were found to uninstall.
Successfully installed nvtabular-1.6.0+10.gff186c6f
test-gpu run-test: commands[2] | python -m pytest --cov-report term --cov merlin -rxs tests/unit
============================= test session starts ==============================
platform linux -- Python 3.8.10, pytest-7.1.3, pluggy-1.0.0
cachedir: .tox/test-gpu/.pytest_cache
rootdir: /var/jenkins_home/workspace/merlin_dataloader/dataloader, configfile: pyproject.toml
plugins: anyio-3.5.0, xdist-3.0.2, cov-4.0.0
collected 94 items / 1 skipped
tests/unit/dataloader/test_dataloader_backend.py .... [ 4%]
tests/unit/dataloader/test_tf_dataloader.py F........................... [ 34%]
.........s... [ 47%]
tests/unit/dataloader/test_tf_embeddings.py ............ [ 60%]
tests/unit/dataloader/test_torch_dataloader.py ......................... [ 87%]
[ 87%]
tests/unit/dataloader/test_torch_embeddings.py ............ [100%]
=================================== FAILURES ===================================
_________________________ test_list_features_load_time _________________________
tmpdir = local('/tmp/pytest-of-jenkins/pytest-2/test_list_features_load_time0')
def test_list_features_load_time(tmpdir):
num_rows = 1000
num_features = 40
df = make_df(
{
f"feature_{i}": [[random.randint(1, 10) for _ in range(4)] for _ in range(num_rows)]
for i in range(num_features)
}
)
dataset = Dataset(df)
loader = tf_dataloader.Loader(dataset, batch_size=1)
start_t = time.time()
_ = next(loader)
end_t = time.time()
first_batch_load_time = end_t - start_t
> assert first_batch_load_time < 1.0
E assert 30.275941848754883 < 1.0
tests/unit/dataloader/test_tf_dataloader.py:60: AssertionError
----------------------------- Captured stderr call -----------------------------
2022-11-24 15:03:36.848724: I tensorflow/core/platform/cpu_feature_guard.cc:193] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA
To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags.
2022-11-24 15:03:39.883364: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1532] Created device /job:localhost/replica:0/task:0/device:GPU:0 with 8139 MB memory: -> device: 0, name: Tesla P100-DGXS-16GB, pci bus id: 0000:07:00.0, compute capability: 6.0
2022-11-24 15:03:39.884135: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1532] Created device /job:localhost/replica:0/task:0/device:GPU:1 with 15149 MB memory: -> device: 1, name: Tesla P100-DGXS-16GB, pci bus id: 0000:08:00.0, compute capability: 6.0
2022-11-24 15:03:39.884757: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1532] Created device /job:localhost/replica:0/task:0/device:GPU:2 with 15149 MB memory: -> device: 2, name: Tesla P100-DGXS-16GB, pci bus id: 0000:0e:00.0, compute capability: 6.0
2022-11-24 15:03:39.885381: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1532] Created device /job:localhost/replica:0/task:0/device:GPU:3 with 15149 MB memory: -> device: 3, name: Tesla P100-DGXS-16GB, pci bus id: 0000:0f:00.0, compute capability: 6.0
=============================== warnings summary ===============================
../../../../../usr/local/lib/python3.8/dist-packages/dask_cudf/core.py:33
/usr/local/lib/python3.8/dist-packages/dask_cudf/core.py:33: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
DASK_VERSION = LooseVersion(dask.__version__)
.tox/test-gpu/lib/python3.8/site-packages/setuptools/_distutils/version.py:346: 34 warnings
/var/jenkins_home/workspace/merlin_dataloader/dataloader/.tox/test-gpu/lib/python3.8/site-packages/setuptools/_distutils/version.py:346: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
other = LooseVersion(other)
tests/unit/dataloader/test_dataloader_backend.py::test_dataloader_seeding[128]
/var/jenkins_home/.local/lib/python3.8/site-packages/pandas/core/indexing.py:1732: SettingWithCopyWarning:
A value is trying to be set on a copy of a slice from a DataFrame
See the caveats in the documentation: https://pandas.pydata.org/pandas-docs/stable/user_guide/indexing.html#returning-a-view-versus-a-copy
self._setitem_single_block(indexer, value, name)
tests/unit/dataloader/test_dataloader_backend.py::test_dataloader_empty_error[128]
/var/jenkins_home/workspace/merlin_dataloader/dataloader/merlin/dataloader/loader_base.py:84: UserWarning: no schema associated with the input dataset. Calling dataset.infer_schema to automatically generate
warnings.warn(
tests/unit/dataloader/test_tf_dataloader.py: 7 warnings
tests/unit/dataloader/test_torch_dataloader.py: 11 warnings
/var/jenkins_home/workspace/merlin_dataloader/dataloader/.tox/test-gpu/lib/python3.8/site-packages/merlin/io/dataset.py:256: UserWarning: Initializing an NVTabular Dataset in CPU mode.This is an experimental feature with extremely limited support!
warnings.warn(
tests/unit/dataloader/test_torch_embeddings.py::test_embedding_torch_dl_with_lookup[None]
/var/jenkins_home/workspace/merlin_dataloader/dataloader/merlin/dataloader/ops/embeddings/torch_embedding_op.py:52: UserWarning: Creating a tensor from a list of numpy.ndarrays is extremely slow. Please consider converting the list to a single numpy.ndarray with numpy.array() before converting to a tensor. (Triggered internally at ../torch/csrc/utils/tensor_new.cpp:201.)
return torch.Tensor(values).to(torch.int32)
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
---------- coverage: platform linux, python 3.8.10-final-0 -----------
Name Stmts Miss Cover
----------------------------------------------------------------------------
merlin/dataloader/__init__.py 2 0 100%
merlin/dataloader/_version.py 354 205 42%
merlin/dataloader/jax.py 51 51 0%
merlin/dataloader/loader_base.py 418 31 93%
merlin/dataloader/ops/__init__.py 0 0 100%
merlin/dataloader/ops/embeddings/__init__.py 0 0 100%
merlin/dataloader/ops/embeddings/embedding_op.py 62 6 90%
merlin/dataloader/ops/embeddings/tf_embedding_op.py 19 0 100%
merlin/dataloader/ops/embeddings/torch_embedding_op.py 20 0 100%
merlin/dataloader/tensorflow.py 112 20 82%
merlin/dataloader/tf_utils.py 57 27 53%
merlin/dataloader/torch.py 66 8 88%
merlin/loader/__init__.py 4 4 0%
merlin/loader/jax.py 1 1 0%
merlin/loader/tensorflow.py 1 1 0%
merlin/loader/torch.py 1 1 0%
----------------------------------------------------------------------------
TOTAL 1168 355 70%
=========================== short test summary info ============================
SKIPPED [1] tests/unit/dataloader/test_jax_dataloader.py:24: could not import 'jax': No module named 'jax'
SKIPPED [1] tests/unit/dataloader/test_tf_dataloader.py:505: not working correctly in ci environment
======= 1 failed, 92 passed, 2 skipped, 56 warnings in 184.50s (0:03:04) =======
ERROR: InvocationError for command /var/jenkins_home/workspace/merlin_dataloader/dataloader/.tox/test-gpu/bin/python -m pytest --cov-report term --cov merlin -rxs tests/unit (exited with code 1)
___________________________________ summary ____________________________________
ERROR: test-gpu: commands failed
Build step 'Execute shell' marked build as failure
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script : #!/bin/bash
cd /var/jenkins_home/
CUDA_VISIBLE_DEVICES=1 python test_res_push.py "https://api.GitHub.com/repos/NVIDIA-Merlin/Merlin/issues/$ghprbPullId/comments" "/var/jenkins_home/jobs/$JOB_NAME/builds/$BUILD_NUMBER/log"
[merlin_dataloader] $ /bin/bash /tmp/jenkins9027614629964811064.sh
In current NGC containers some pythons packages are installed with a --user option for the root user. In managed notebooks, containers are run as in the context of the jupyter user, which means that some packages fail to run.
This will prevent run Merlin docker as other user generally as well. @sohn21c