g++:erroe

[PeiqiGao]

CUDA:11.1 ubuntu:16.04 python:3.8 torch;1.9.0 I use setup.py then it tells: `WARNING: Skipping MinkowskiEngine as it is not installed.

| CUDA compilation set |

Using BLAS=openblas Using the default compiler running install running bdist_egg running egg_info writing MinkowskiEngine.egg-info/PKG-INFO writing dependency_links to MinkowskiEngine.egg-info/dependency_links.txt writing requirements to MinkowskiEngine.egg-info/requires.txt writing top-level names to MinkowskiEngine.egg-info/top_level.txt reading manifest file 'MinkowskiEngine.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'MinkowskiEngine.egg-info/SOURCES.txt' installing library code to build/bdist.linux-x86_64/egg running install_lib running build_py creating build creating build/lib.linux-x86_64-3.8 creating build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiChannelwiseConvolution.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiPooling.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/diagnostics.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiNormalization.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiNetwork.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiFunctional.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiPruning.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiSparseTensor.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiTensorField.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiConvolution.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiBroadcast.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/sparse_matrix_functions.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiTensor.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiCommon.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiNonlinearity.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/init.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiCoordinateManager.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiKernelGenerator.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiInterpolation.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiOps.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine copying ./MinkowskiEngine/MinkowskiUnion.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine creating build/lib.linux-x86_64-3.8/MinkowskiEngine/utils copying ./MinkowskiEngine/utils/summary.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine/utils copying ./MinkowskiEngine/utils/collation.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine/utils copying ./MinkowskiEngine/utils/gradcheck.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine/utils copying ./MinkowskiEngine/utils/init.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine/utils copying ./MinkowskiEngine/utils/init.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine/utils copying ./MinkowskiEngine/utils/coords.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine/utils copying ./MinkowskiEngine/utils/quantization.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine/utils creating build/lib.linux-x86_64-3.8/MinkowskiEngine/modules copying ./MinkowskiEngine/modules/resnet_block.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine/modules copying ./MinkowskiEngine/modules/senet_block.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine/modules copying ./MinkowskiEngine/modules/init.py -> build/lib.linux-x86_64-3.8/MinkowskiEngine/modules running build_ext building 'MinkowskiEngineBackend._C' extension creating /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8 creating /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home creating /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq creating /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine creating /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src creating /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/pybind Emitting ninja build file /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/build.ninja... Compiling objects... Allowing ninja to set a default number of workers... (overridable by setting the environment variable MAX_JOBS=N) 1.10.2.git.kitware.jobserver-1 creating build/lib.linux-x86_64-3.8/MinkowskiEngineBackend g++ -pthread -shared -B /home/gpq/anaconda3/compiler_compat -L/home/gpq/anaconda3/lib -Wl,-rpath=/home/gpq/anaconda3/lib -Wl,--no-as-needed -Wl,--sysroot=/ /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/math_functions_cpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/math_functions_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/coordinate_map_manager.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/coordinate_map_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/convolution_kernel.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/convolution_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/convolution_transpose_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/pooling_avg_kernel.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/pooling_max_kernel.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/local_pooling_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/local_pooling_transpose_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/global_pooling_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/broadcast_kernel.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/broadcast_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/pruning_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/interpolation_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/spmm.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/quantization.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/direct_max_pool.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/pybind/minkowski.o -L/home/gpq/anaconda3/lib/python3.8/site-packages/torch/lib -L/usr/local/cuda-11.1/lib64 -lcusparse -lopenblas -lopenblas -lc10 -ltorch -ltorch_cpu -ltorch_python -lcudart -lc10_cuda -ltorch_cuda_cu -ltorch_cuda_cpp -o build/lib.linux-x86_64-3.8/MinkowskiEngineBackend/_C.cpython-38-x86_64-linux-gnu.so g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/math_functions_cpu.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/math_functions_gpu.o:No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/coordinate_map_manager.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/coordinate_map_gpu.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/convolution_kernel.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/convolution_gpu.o:No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/convolution_transpose_gpu.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/pooling_avg_kernel.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/pooling_max_kernel.o:No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/local_pooling_gpu.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/local_pooling_transpose_gpu.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/global_pooling_gpu.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/broadcast_kernel.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/broadcast_gpu.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/pruning_gpu.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/interpolation_gpu.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/spmm.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/gpu.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/quantization.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/direct_max_pool.o: No such file or directory g++: error: /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/pybind/minkowski.o: No such file or directory error: Command "g++ -pthread -shared -B /home/gpq/anaconda3/compiler_compat -L/home/gpq/anaconda3/lib -Wl,-rpath=/home/gpq/anaconda3/lib -Wl,--no-as-needed -Wl,--sysroot=/ /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/math_functions_cpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/math_functions_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/coordinate_map_manager.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/coordinate_map_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/convolution_kernel.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/convolution_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/convolution_transpose_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/pooling_avg_kernel.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/pooling_max_kernel.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/local_pooling_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/local_pooling_transpose_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/global_pooling_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/broadcast_kernel.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/broadcast_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/pruning_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/interpolation_gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/spmm.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/gpu.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/quantization.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/home/gpq/MinkowskiEngine/src/direct_max_pool.o /home/gpq/MinkowskiEngine/build/temp.linux-x86_64-3.8/pybind/minkowski.o -L/home/gpq/anaconda3/lib/python3.8/site-packages/torch/lib -L/usr/local/cuda-11.1/lib64 -lcusparse -lopenblas -lopenblas -lc10 -ltorch -ltorch_cpu -ltorch_python -lcudart -lc10_cuda -ltorch_cuda_cu -ltorch_cuda_cpp -o build/lib.linux-x86_64-3.8/MinkowskiEngineBackend/_C.cpython-38-x86_64-linux-gnu.so" failed with exit status 1 `

[zhangzihui247]

hello, could you tell me how to solve this issue? I meet same one

[PeiqiGao]

sry I gived up……

[thiagodma]

Why is this issue closed? @chrischoy

[BoPang1996]

I have the same problem, how to solve this

[limian1761]

I checked the building file, that said .ninja_required_version = 1.3. My ninjia is 1.10.2.3. So I reinstall 啊eraly version of ninjia。

for me: i use "pip install ninja==1.5.3 ", it works

[limian1761]

I checked the building file, that said .ninja_required_version = 1.3. My ninjia is 1.10.2.3. So I reinstall early version of ninjia。

for me: i use "pip install ninja==1.5.3 ", it works

[thiagodma]

Guys, try using this dockerfile

FROM pytorch/pytorch:1.9.1-cuda11.1-cudnn8-devel

WORKDIR /app

##############################################
# You should modify this to match your GPU compute capability
# https://developer.nvidia.com/cuda-gpus#compute
ENV TORCH_CUDA_ARCH_LIST="8.6"
##############################################

ENV TORCH_NVCC_FLAGS="-Xfatbin -compress-all"
ENV CUDA_HOME=/usr/local/cuda-11.1
ENV MAX_JOBS=1

# Install dependencies
RUN apt-get update
RUN apt-get install -y git ninja-build cmake build-essential libopenblas-dev \
    xterm xauth openssh-server tmux wget mate-desktop-environment-core

RUN apt-get clean
RUN rm -rf /var/lib/apt/lists/*

# activate base conda env
SHELL ["conda", "run", "-n", "base", "/bin/bash", "-c"]

RUN pip install -U git+https://github.com/NVIDIA/MinkowskiEngine -v --no-deps --install-option="--force_cuda" --install-option="--blas=openblas"

RUN conda install matplotlib=3.4.2 \
    && conda install pandas=1.3.3 \
    && conda install scikit-learn=0.24.2 \
    && conda install seaborn=0.11.2 \
    && conda install -c open3d-admin open3d

RUN pip install addict plyfile

COPY 3d-fast-slow-motion /app/3d-fast-slow-motion
VOLUME data /app/data
VOLUME scripts /app/scripts

RUN cd 3d-fast-slow-motion && pip install -e .

RUN echo "source activate base" > ~/.bashrc