Error compiling objects for extension while installing with python

[AlonzoLeeeooo]

The error log is as follows. `FAILED: /home/liuchang/MinkowskiEngine/build/temp.linux-x86_64-3.9/home/liuchang/MinkowskiEngine/src/spmm.o /usr/local/cuda/bin/nvcc -I/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/torch/include -I/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/torch/include/torch/csrc/api/include -I/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/torch/include/TH -I/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/torch/include/THC -I/usr/local/cuda/include -I/home/liuchang/MinkowskiEngine/src -I/home/liuchang/MinkowskiEngine/src/3rdparty -I/home/liuchang/anaconda3/envs/PCGCv2/include/python3.9 -c -c /home/liuchang/MinkowskiEngine/src/spmm.cu -o /home/liuchang/MinkowskiEngine/build/temp.linux-x86_64-3.9/home/liuchang/MinkowskiEngine/src/spmm.o -DCUDA_NO_HALF_OPERATORS -DCUDA_NO_HALF_CONVERSIONS -DCUDA_NO_BFLOAT16_CONVERSIONS -DCUDA_NO_HALF2_OPERATORS --expt-relaxed-constexpr --compiler-options ''"'"'-fPIC'"'"'' --expt-relaxed-constexpr --expt-extended-lambda -O3 -Xcompiler=-fno-gnu-unique -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="_gcc"' '-DPYBIND11_STDLIB="_libstdcpp"' '-DPYBIND11_BUILD_ABI="_cxxabi1011"' -DTORCH_EXTENSION_NAME=_C -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=compute_61 -gencode=arch=compute_61,code=sm_61 -std=c++14 /home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/torch/include/c10/util/ArrayRef.h(142): error: expression must be a pointer to a complete object type detected during instantiation of "c10::ArrayRef::iterator c10::ArrayRef::end() const [with T=at::Tensor]" /home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/torch/include/ATen/cuda/CUDAUtils.h(14): here

/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/torch/include/ATen/cuda/CUDAUtils.h(15): error: incomplete type is not allowed

/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/torch/include/ATen/NamedTensorUtils.h(14): error: no instance of function template "std::any_of" matches the argument list argument types are: (const at::Tensor *, , lambda [](const at::Tensor &)->__nv_bool)

/home/liuchang/MinkowskiEngine/src/spmm.cu(102): warning: variable "is_int64" was declared but never referenced

/home/liuchang/MinkowskiEngine/src/spmm.cu(364): warning: variable "is_int64" was declared but never referenced

/home/liuchang/MinkowskiEngine/src/spmm.cu(473): warning: variable "num_unique_keys" was set but never used detected during instantiation of "std::vector<at::Tensor, std::allocator> minkowski::coo_spmm_average(const at::Tensor &, const at::Tensor &, int64_t, int64_t, const at::Tensor &, int64_t) [with th_int_type=int32_t]" (601): here

/home/liuchang/MinkowskiEngine/src/spmm.cu(473): warning: variable "num_unique_keys" was set but never used detected during instantiation of "std::vector<at::Tensor, std::allocator> minkowski::coo_spmm_average(const at::Tensor &, const at::Tensor &, int64_t, int64_t, const at::Tensor &, int64_t) [with th_int_type=int32_t]" (601): here

3 errors detected in the compilation of "/tmp/tmpxft_000046e4_00000000-6_spmm.cpp1.ii". ninja: build stopped: subcommand failed. Traceback (most recent call last): File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/torch/utils/cpp_extension.py", line 1740, in _run_ninja_build subprocess.run( File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/subprocess.py", line 528, in run raise CalledProcessError(retcode, process.args, subprocess.CalledProcessError: Command '['ninja', '-v', '-j', '1']' returned non-zero exit status 1.

The above exception was the direct cause of the following exception:

Traceback (most recent call last): File "/home/liuchang/MinkowskiEngine/setup.py", line 317, in setup( File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/setuptools/init.py", line 153, in setup return distutils.core.setup(**attrs) File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/distutils/core.py", line 148, in setup dist.run_commands() File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/distutils/dist.py", line 966, in run_commands self.run_command(cmd) File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/distutils/dist.py", line 985, in run_command cmd_obj.run() File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/setuptools/command/install.py", line 67, in run self.do_egg_install() File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/setuptools/command/install.py", line 109, in do_egg_install self.run_command('bdist_egg') File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/distutils/cmd.py", line 313, in run_command self.distribution.run_command(command) File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/distutils/dist.py", line 985, in run_command cmd_obj.run() File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/setuptools/command/bdist_egg.py", line 164, in run cmd = self.call_command('install_lib', warn_dir=0) File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/setuptools/command/bdist_egg.py", line 150, in call_command self.run_command(cmdname) File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/distutils/cmd.py", line 313, in run_command self.distribution.run_command(command) File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/distutils/dist.py", line 985, in run_command cmd_obj.run() File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/setuptools/command/install_lib.py", line 11, in run self.build() File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/distutils/command/install_lib.py", line 107, in build self.run_command('build_ext') File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/distutils/cmd.py", line 313, in run_command self.distribution.run_command(command) File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/distutils/dist.py", line 985, in run_command cmd_obj.run() File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/setuptools/command/build_ext.py", line 79, in run _build_ext.run(self) File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/distutils/command/build_ext.py", line 340, in run self.build_extensions() File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/torch/utils/cpp_extension.py", line 741, in build_extensions build_ext.build_extensions(self) File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/distutils/command/build_ext.py", line 449, in build_extensions self._build_extensions_serial() File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/distutils/command/build_ext.py", line 474, in _build_extensions_serial self.build_extension(ext) File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/setuptools/command/build_ext.py", line 202, in build_extension _build_ext.build_extension(self, ext) File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/distutils/command/build_ext.py", line 529, in build_extension objects = self.compiler.compile(sources, File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/torch/utils/cpp_extension.py", line 562, in unix_wrap_ninja_compile _write_ninja_file_and_compile_objects( File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/torch/utils/cpp_extension.py", line 1419, in _write_ninja_file_and_compile_objects _run_ninja_build( File "/home/liuchang/anaconda3/envs/PCGCv2/lib/python3.9/site-packages/torch/utils/cpp_extension.py", line 1756, in _run_ninja_build raise RuntimeError(message) from e RuntimeError: Error compiling objects for extension`

Have anyone faced the same problem while installing? Please tell me how to fix this. Thanks!

[kuaitoukid]

Excuse me, have you already found a solution?

[AlonzoLeeeooo]

Excuse me, have you already found a solution?

I have solved the issue. It is caused by the cuda version which does not match with MinikowskiEngine. The image I ran into error was of cuda version 10.2. When I change the cuda version to 11.0 or above, the issue gets solved.

[YixinSong-e]

I have same questions, could you tell me the g++'s version on your computer, please? Thanks !

[kuaitoukid]

Excuse me, have you already found a solution?

I have solved the issue. It is caused by the cuda version which does not match with MinikowskiEngine. The image I ran into error was of cuda version 10.2. When I change the cuda version to 11.0 or above, the issue gets solved.

Thank you, it also solved my problem

[YixinSong-e]

Excuse me, have you already found a solution?

I have solved the issue. It is caused by the cuda version which does not match with MinikowskiEngine. The image I ran into error was of cuda version 10.2. When I change the cuda version to 11.0 or above, the issue gets solved.

Thank you, it also solved my problem

I have same questions, could you tell me the g++'s version on your computer, please? Thanks !

[AlonzoLeeeooo]

Excuse me, have you already found a solution?

I have solved the issue. It is caused by the cuda version which does not match with MinikowskiEngine. The image I ran into error was of cuda version 10.2. When I change the cuda version to 11.0 or above, the issue gets solved.

Thank you, it also solved my problem

I have same questions, could you tell me the g++'s version on your computer, please? Thanks !

gcc and g++ versions are 7.5.0.