Genome location error in Loops

NYU-BFX / hic-bench

A set of pipelines for Hi-C and ChIP-Seq analysis.

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Genome location error in Loops #17

Open RXCoux opened 3 years ago

RXCoux commented 3 years ago

Hello,

I believe there's a bug in the loops step: I get the following error Error: Can't open genome file */__14a-loops/inputs/genomes/dm6/genome/bowtie2.index/genome.fa.fai Exiting...

The correct path is */__14a-loops/inputs/genomes/dm6/bowtie2.index/genome.fa.fai so I'm assuming the code points to an incorrect genome file location, I tried finding where rapidly but did not...

Thanks

javrodriguez commented 3 years ago

Hi RXCoux,

Please send me a message to Javier.RodriguezHernaez@nyulangone.org to discuss the issue.

Best, Javier