resume not working with RealignerTargetCreator step

NYU-Molecular-Pathology / NGS580-nf

Target exome sequencing analysis for NYU NGS580 gene panel

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resume not working with RealignerTargetCreator step #12

Closed stevekm closed 5 years ago

stevekm commented 5 years ago

when trying to resume a completed pipeline, variant calling keeps getting started over again unnescessarily, starting at the RealignerTargetCreator, followed by the IndelRealigner step. Need to figure out why these steps are not 'resume'ing properly, its causing large delays in the re-processing and updating of old runs

stevekm commented 5 years ago

havent seen this in a while so closing this