Need to refactor LoFreq and HaplotypeCaller to use separate filter and tsv processes - Githubissues

NYU-Molecular-Pathology / NGS580-nf

Target exome sequencing analysis for NYU NGS580 gene panel

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Need to refactor LoFreq and HaplotypeCaller to use separate filter and tsv processes #19

Closed stevekm closed 5 years ago

stevekm commented 5 years ago

use the same processes as the new VarScan2 steps